Protein–RNA interactions for Protein: P16649

TUP1, General transcriptional corepressor TUP1, yeastyeast

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TUP1P16649 YJL182CYJL182C 318 nt2.32□□□□□ -2.04
TUP1P16649 YLR466C-BYLR466C-B 117 nt2.32□□□□□ -2.04
TUP1P16649 YOR333CYOR333C 417 nt2.32□□□□□ -2.04
TUP1P16649 NUP170YBL079W 4509 nt2.32□□□□□ -2.04
TUP1P16649 REV3YPL167C 4515 nt2.32□□□□□ -2.04
TUP1P16649 NUP100YKL068W 2880 nt2.31□□□□□ -2.04
TUP1P16649 snR60snR60 104 nt2.31□□□□□ -2.04
TUP1P16649 YKL165C-AYKL165C-A 234 nt2.31□□□□□ -2.04
TUP1P16649 YNL114CYNL114C 372 nt2.31□□□□□ -2.04
TUP1P16649 YBL083CYBL083C 426 nt2.31□□□□□ -2.04
TUP1P16649 YOL160WYOL160W 342 nt2.31□□□□□ -2.04
TUP1P16649 SET2YJL168C 2202 nt2.31□□□□□ -2.04
TUP1P16649 COS111YBR203W 2775 nt2.31□□□□□ -2.04
TUP1P16649 SLM1YIL105C 2061 nt2.3□□□□□ -2.04
TUP1P16649 UBP2YOR124C 3819 nt2.3□□□□□ -2.04
TUP1P16649 IRR1YIL026C 3453 nt2.29□□□□□ -2.04
TUP1P16649 SWI6YLR182W 2412 nt2.29□□□□□ -2.04
TUP1P16649 snR55snR55 98 nt2.29□□□□□ -2.04
TUP1P16649 YDR426CYDR426C 378 nt2.29□□□□□ -2.04
TUP1P16649 VTC1YER072W 390 nt2.29□□□□□ -2.04
TUP1P16649 RPL42BYHR141C 321 nt2.29□□□□□ -2.04
TUP1P16649 RPL42AYNL162W 321 nt2.29□□□□□ -2.04
TUP1P16649 YOR011W-AYOR011W-A 207 nt2.29□□□□□ -2.04
TUP1P16649 SSD1YDR293C 3753 nt2.28□□□□□ -2.04
TUP1P16649 NOP14YDL148C 2433 nt2.28□□□□□ -2.04
TUP1P16649 STH1YIL126W 4080 nt2.28□□□□□ -2.04
TUP1P16649 YGR151CYGR151C 336 nt2.28□□□□□ -2.04
TUP1P16649 UPS1YLR193C 528 nt2.28□□□□□ -2.04
TUP1P16649 YOR302WYOR302W 78 nt2.28□□□□□ -2.04
TUP1P16649 YPR063CYPR063C 423 nt2.28□□□□□ -2.04
TUP1P16649 SPP41YDR464W 4308 nt2.28□□□□□ -2.04
TUP1P16649 PXA2YKL188C 2562 nt2.27□□□□□ -2.05
TUP1P16649 VMR1YHL035C 4779 nt2.27□□□□□ -2.05
TUP1P16649 YDR286CYDR286C 345 nt2.27□□□□□ -2.05
TUP1P16649 GPG1YGL121C 381 nt2.27□□□□□ -2.05
TUP1P16649 MVP1YMR004W 1536 nt2.27□□□□□ -2.05
TUP1P16649 NOP53YPL146C 1368 nt2.26□□□□□ -2.05
TUP1P16649 RPH1YER169W 2391 nt2.26□□□□□ -2.05
TUP1P16649 MDM20YOL076W 2391 nt2.26□□□□□ -2.05
TUP1P16649 YPR002C-AYPR002C-A 198 nt2.26□□□□□ -2.05
TUP1P16649 CFT2YLR115W 2580 nt2.26□□□□□ -2.05
TUP1P16649 MUK1YPL070W 1839 nt2.26□□□□□ -2.05
TUP1P16649 EDS1YBR033W 2760 nt2.26□□□□□ -2.05
TUP1P16649 YGR250CYGR250C 2346 nt2.25□□□□□ -2.05
TUP1P16649 MET18YIL128W 3099 nt2.25□□□□□ -2.05
TUP1P16649 PAU2YEL049W 363 nt2.25□□□□□ -2.05
TUP1P16649 YMR172C-AYMR172C-A 384 nt2.25□□□□□ -2.05
TUP1P16649 CYB5YNL111C 363 nt2.25□□□□□ -2.05
TUP1P16649 SCW11YGL028C 1629 nt2.24□□□□□ -2.05
TUP1P16649 YCR043CYCR043C 384 nt2.24□□□□□ -2.05
TUP1P16649 YDL185C-AYDL185C-A 228 nt2.24□□□□□ -2.05
TUP1P16649 BRP1YGL007W 378 nt2.24□□□□□ -2.05
TUP1P16649 TRX1YLR043C 312 nt2.24□□□□□ -2.05
TUP1P16649 YMR141W-AYMR141W-A 225 nt2.24□□□□□ -2.05
TUP1P16649 YNL338WYNL338W 159 nt2.24□□□□□ -2.05
TUP1P16649 KRE33YNL132W 3171 nt2.24□□□□□ -2.05
TUP1P16649 BNI1YNL271C 5862 nt2.24□□□□□ -2.05
TUP1P16649 SLY1YDR189W 2001 nt2.24□□□□□ -2.05
TUP1P16649 MNE1YOR350C 1992 nt2.23□□□□□ -2.05
TUP1P16649 BRE1YDL074C 2103 nt2.23□□□□□ -2.05
TUP1P16649 SWI5YDR146C 2130 nt2.23□□□□□ -2.05
TUP1P16649 YCR102W-AYCR102W-A 198 nt2.23□□□□□ -2.05
TUP1P16649 YHR180W-AYHR180W-A 183 nt2.23□□□□□ -2.05
TUP1P16649 YBL008W-AYBL008W-A 240 nt2.23□□□□□ -2.05
TUP1P16649 YOR015WYOR015W 360 nt2.23□□□□□ -2.05
TUP1P16649 RAV1YJR033C 4074 nt2.23□□□□□ -2.05
TUP1P16649 VPS8YAL002W 3825 nt2.22□□□□□ -2.05
TUP1P16649 YGL052WYGL052W 306 nt2.22□□□□□ -2.05
TUP1P16649 ATP7YKL016C 525 nt2.22□□□□□ -2.05
TUP1P16649 YLR255CYLR255C 354 nt2.22□□□□□ -2.05
TUP1P16649 YOR394C-AYOR394C-A 168 nt2.22□□□□□ -2.05
TUP1P16649 INP2YMR163C 2118 nt2.21□□□□□ -2.06
TUP1P16649 SSS1YDR086C 243 nt2.21□□□□□ -2.06
TUP1P16649 EMP24YGL200C 612 nt2.21□□□□□ -2.06
TUP1P16649 PAU8YAL068C 363 nt2.21□□□□□ -2.06
TUP1P16649 PAU20YOL161C 363 nt2.21□□□□□ -2.06
TUP1P16649 NEO1YIL048W 3456 nt2.21□□□□□ -2.06
TUP1P16649 UBP1YDL122W 2430 nt2.21□□□□□ -2.06
TUP1P16649 RFX1YLR176C 2436 nt2.21□□□□□ -2.06
TUP1P16649 SSQ1YLR369W 1974 nt2.21□□□□□ -2.06
TUP1P16649 tF(GAA)QtF(GAA)Q 75 nt2.2□□□□□ -2.06
TUP1P16649 RPS17AYML024W 411 nt2.2□□□□□ -2.06
TUP1P16649 YMR321CYMR321C 318 nt2.2□□□□□ -2.06
TUP1P16649 CSE2YNR010W 450 nt2.2□□□□□ -2.06
TUP1P16649 UBR1YGR184C 5853 nt2.2□□□□□ -2.06
TUP1P16649 YLR154W-AYLR154W-A 186 nt2.19□□□□□ -2.06
TUP1P16649 YMR230W-AYMR230W-A 189 nt2.19□□□□□ -2.06
TUP1P16649 YNL028WYNL028W 318 nt2.19□□□□□ -2.06
TUP1P16649 TFC8YPL007C 1767 nt2.18□□□□□ -2.06
TUP1P16649 PLC1YPL268W 2610 nt2.18□□□□□ -2.06
TUP1P16649 MRP10YDL045W-A 288 nt2.18□□□□□ -2.06
TUP1P16649 INA22YIR024C 651 nt2.18□□□□□ -2.06
TUP1P16649 YJL150WYJL150W 303 nt2.18□□□□□ -2.06
TUP1P16649 YLR120W-AYLR120W-A 102 nt2.18□□□□□ -2.06
TUP1P16649 RPB10YOR210W 213 nt2.18□□□□□ -2.06
TUP1P16649 LCD1YDR499W 2244 nt2.18□□□□□ -2.06
TUP1P16649 SEC16YPL085W 6588 nt2.18□□□□□ -2.06
TUP1P16649 YDL007C-AYDL007C-A 258 nt2.17□□□□□ -2.06
TUP1P16649 ATP8Q0080 147 nt2.17□□□□□ -2.06
TUP1P16649 YER088C-AYER088C-A 324 nt2.17□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 55 ms