Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.68■□□□□ 0.9
BRAFP15056 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRAFP15056 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRAFP15056 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRAFP15056 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
BRAFP15056 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.67■□□□□ 0.9
BRAFP15056 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRAFP15056 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRAFP15056 AC011484.1-201ENST00000377652 1995 ntBASIC20.67■□□□□ 0.9
BRAFP15056 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
BRAFP15056 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.67■□□□□ 0.9
BRAFP15056 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRAFP15056 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRAFP15056 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.67■□□□□ 0.9
BRAFP15056 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.67■□□□□ 0.9
BRAFP15056 KRT18P11-201ENST00000435214 1283 ntBASIC20.67■□□□□ 0.9
BRAFP15056 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.67■□□□□ 0.9
BRAFP15056 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.67■□□□□ 0.9
BRAFP15056 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.67■□□□□ 0.9
BRAFP15056 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRAFP15056 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
BRAFP15056 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.67■□□□□ 0.9
BRAFP15056 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRAFP15056 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.67■□□□□ 0.9
BRAFP15056 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.67■□□□□ 0.9
BRAFP15056 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.67■□□□□ 0.9
BRAFP15056 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
BRAFP15056 AC018445.3-201ENST00000624177 1945 ntBASIC20.66■□□□□ 0.9
BRAFP15056 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRAFP15056 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRAFP15056 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRAFP15056 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRAFP15056 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRAFP15056 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.66■□□□□ 0.9
BRAFP15056 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.66■□□□□ 0.9
BRAFP15056 MFSD11-216ENST00000590393 1141 ntBASIC20.66■□□□□ 0.9
BRAFP15056 RAP2CP1-201ENST00000605103 478 ntBASIC20.66■□□□□ 0.9
BRAFP15056 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRAFP15056 AC011767.1-201ENST00000617410 1153 ntBASIC20.66■□□□□ 0.9
BRAFP15056 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.66■□□□□ 0.9
BRAFP15056 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRAFP15056 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRAFP15056 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRAFP15056 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRAFP15056 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRAFP15056 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
BRAFP15056 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRAFP15056 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRAFP15056 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRAFP15056 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRAFP15056 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.65■□□□□ 0.9
BRAFP15056 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRAFP15056 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
BRAFP15056 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
BRAFP15056 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRAFP15056 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.65■□□□□ 0.9
BRAFP15056 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
BRAFP15056 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BRAFP15056 CDCA4P2-201ENST00000441182 718 ntBASIC20.65■□□□□ 0.9
BRAFP15056 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.65■□□□□ 0.9
BRAFP15056 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.65■□□□□ 0.9
BRAFP15056 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BRAFP15056 AC073111.5-205ENST00000641717 521 ntBASIC20.65■□□□□ 0.9
BRAFP15056 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
BRAFP15056 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BRAFP15056 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRAFP15056 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
BRAFP15056 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
BRAFP15056 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRAFP15056 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRAFP15056 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRAFP15056 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRAFP15056 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRAFP15056 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.9
BRAFP15056 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BRAFP15056 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BRAFP15056 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
BRAFP15056 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRAFP15056 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRAFP15056 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
BRAFP15056 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRAFP15056 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
BRAFP15056 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.64■□□□□ 0.89
BRAFP15056 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BRAFP15056 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.64■□□□□ 0.89
BRAFP15056 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.64■□□□□ 0.89
BRAFP15056 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRAFP15056 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.64■□□□□ 0.89
BRAFP15056 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
BRAFP15056 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.64■□□□□ 0.89
BRAFP15056 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRAFP15056 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRAFP15056 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.64■□□□□ 0.89
BRAFP15056 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRAFP15056 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.63■□□□□ 0.89
BRAFP15056 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRAFP15056 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRAFP15056 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BRAFP15056 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
BRAFP15056 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms