Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 ZNF692-207ENST00000468455 644 ntTSL 520■□□□□ 0.795e-19■□□□□ 8.5
XRCC6P12956 ZNF692-214ENST00000483223 901 ntTSL 319.95■□□□□ 0.785e-19■□□□□ 8.5
XRCC6P12956 ZNF692-222ENST00000528141 576 ntTSL 419.56■□□□□ 0.725e-19■□□□□ 8.5
XRCC6P12956 ZNF692-206ENST00000463519 2704 ntTSL 1 (best)19.15■□□□□ 0.665e-19■□□□□ 8.5
XRCC6P12956 ZNF692-223ENST00000530699 896 ntTSL 1 (best)18.99■□□□□ 0.635e-19■□□□□ 8.5
XRCC6P12956 ZNF692-230ENST00000534660 552 ntTSL 315.61■□□□□ 0.095e-19■□□□□ 8.5
XRCC6P12956 ZNF692-216ENST00000491971 805 ntTSL 213.99□□□□□ -0.175e-19■□□□□ 8.5
XRCC6P12956 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.854e-22■□□□□ 8.5
XRCC6P12956 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.344e-22■□□□□ 8.5
XRCC6P12956 ZNF292-207ENST00000496806 770 ntTSL 315.82■□□□□ 0.123e-7■□□□□ 8.5
XRCC6P12956 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.013e-7■□□□□ 8.5
XRCC6P12956 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.13e-7■□□□□ 8.5
XRCC6P12956 FURIN-204ENST00000560018 421 ntTSL 221.47■■□□□ 1.031e-14■□□□□ 8.5
XRCC6P12956 FURIN-202ENST00000558794 844 ntTSL 520.48■□□□□ 0.871e-14■□□□□ 8.5
XRCC6P12956 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.531e-14■□□□□ 8.5
XRCC6P12956 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.331e-14■□□□□ 8.5
XRCC6P12956 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC16.96■□□□□ 0.311e-14■□□□□ 8.5
XRCC6P12956 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.091e-14■□□□□ 8.5
XRCC6P12956 FURIN-208ENST00000640725 224 ntTSL 5 BASIC13.87□□□□□ -0.191e-14■□□□□ 8.5
XRCC6P12956 AC005394.1-201ENST00000589999 1269 ntTSL 1 (best) BASIC11.31□□□□□ -0.61e-14■□□□□ 8.5
XRCC6P12956 ZNF316-203ENST00000614588 939 ntTSL 323.82■■□□□ 1.49e-8■□□□□ 8.4
XRCC6P12956 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.939e-8■□□□□ 8.4
XRCC6P12956 ATP8B3-205ENST00000531925 5237 ntTSL 220.32■□□□□ 0.849e-8■□□□□ 8.4
XRCC6P12956 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.89e-8■□□□□ 8.4
XRCC6P12956 MINK1-209ENST00000574453 4941 ntTSL 1 (best)18.98■□□□□ 0.639e-8■□□□□ 8.4
XRCC6P12956 MINK1-207ENST00000572330 5299 ntTSL 518.46■□□□□ 0.559e-8■□□□□ 8.4
XRCC6P12956 ELP4-206ENST00000638317 450 ntTSL 318.43■□□□□ 0.549e-8■□□□□ 8.4
XRCC6P12956 MINK1-204ENST00000571207 4569 ntTSL 518.06■□□□□ 0.489e-8■□□□□ 8.4
XRCC6P12956 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.489e-8■□□□□ 8.4
XRCC6P12956 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.319e-8■□□□□ 8.4
XRCC6P12956 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC16.75■□□□□ 0.279e-8■□□□□ 8.4
XRCC6P12956 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.229e-8■□□□□ 8.4
XRCC6P12956 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.099e-8■□□□□ 8.4
XRCC6P12956 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC15.54■□□□□ 0.089e-8■□□□□ 8.4
XRCC6P12956 ELP4-221ENST00000640081 2385 ntTSL 515.37■□□□□ 0.059e-8■□□□□ 8.4
XRCC6P12956 ELP4-214ENST00000638917 2306 ntTSL 515.33■□□□□ 0.059e-8■□□□□ 8.4
XRCC6P12956 ELP4-217ENST00000639182 857 ntTSL 515.32■□□□□ 0.049e-8■□□□□ 8.4
XRCC6P12956 ATP8B3-202ENST00000525591 4014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.019e-8■□□□□ 8.4
XRCC6P12956 ATP8B3-207ENST00000533993 882 ntTSL 314.78□□□□□ -0.049e-8■□□□□ 8.4
XRCC6P12956 ELP4-222ENST00000640231 2062 ntTSL 5 BASIC14.43□□□□□ -0.19e-8■□□□□ 8.4
XRCC6P12956 ATP8B3-203ENST00000526092 2759 ntTSL 2 BASIC14.33□□□□□ -0.129e-8■□□□□ 8.4
XRCC6P12956 ATP8B3-206ENST00000533107 2187 ntTSL 212.79□□□□□ -0.369e-8■□□□□ 8.4
XRCC6P12956 ELP4-205ENST00000638184 1330 ntTSL 512.7□□□□□ -0.389e-8■□□□□ 8.4
XRCC6P12956 RNF19A-212ENST00000523255 793 ntTSL 312.65□□□□□ -0.389e-8■□□□□ 8.4
XRCC6P12956 ELP4-226ENST00000640790 1249 ntTSL 510.33□□□□□ -0.769e-8■□□□□ 8.4
XRCC6P12956 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.879e-8■□□□□ 8.4
XRCC6P12956 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.389e-8■□□□□ 8.4
XRCC6P12956 RNF19A-214ENST00000523644 274 ntTSL 33.67□□□□□ -1.829e-8■□□□□ 8.4
XRCC6P12956 ELP4-213ENST00000638828 4647 ntTSL 23.64□□□□□ -1.839e-8■□□□□ 8.4
XRCC6P12956 NASP-209ENST00000472408 541 ntTSL 211.3□□□□□ -0.65e-24■□□□□ 8.4
XRCC6P12956 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.361e-10■□□□□ 8.4
XRCC6P12956 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.281e-10■□□□□ 8.4
XRCC6P12956 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.99■■■□□ 2.231e-10■□□□□ 8.4
XRCC6P12956 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.111e-10■□□□□ 8.4
XRCC6P12956 VEGFA-220ENST00000519767 970 ntTSL 1 (best)28.24■■■□□ 2.111e-10■□□□□ 8.4
XRCC6P12956 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.08■■■□□ 2.091e-10■□□□□ 8.4
XRCC6P12956 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.08■■■□□ 2.091e-10■□□□□ 8.4
XRCC6P12956 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.091e-10■□□□□ 8.4
XRCC6P12956 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.08■■■□□ 2.091e-10■□□□□ 8.4
XRCC6P12956 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.091e-10■□□□□ 8.4
XRCC6P12956 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.08■■■□□ 2.091e-10■□□□□ 8.4
XRCC6P12956 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.08■■■□□ 2.091e-10■□□□□ 8.4
XRCC6P12956 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.091e-10■□□□□ 8.4
XRCC6P12956 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.971e-10■□□□□ 8.4
XRCC6P12956 GART-203ENST00000381815 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.533e-7■□□□□ 8.4
XRCC6P12956 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC9.51□□□□□ -0.893e-7■□□□□ 8.4
XRCC6P12956 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.993e-7■□□□□ 8.4
XRCC6P12956 GART-206ENST00000424203 3571 ntTSL 1 (best)8.69□□□□□ -1.023e-7■□□□□ 8.4
XRCC6P12956 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.273e-7■□□□□ 8.4
XRCC6P12956 VEGFA-211ENST00000476772 1683 ntTSL 1 (best)32.33■■■□□ 2.772e-10■□□□□ 8.4
XRCC6P12956 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.194e-7■□□□□ 8.4
XRCC6P12956 RANBP1-204ENST00000416427 645 ntTSL 527.81■■■□□ 2.043e-10■□□□□ 8.4
XRCC6P12956 RBBP6-211ENST00000568316 556 ntTSL 527.7■■■□□ 2.024e-7■□□□□ 8.4
XRCC6P12956 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 24e-7■□□□□ 8.4
XRCC6P12956 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.13■■□□□ 1.774e-7■□□□□ 8.4
XRCC6P12956 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.974e-7■□□□□ 8.4
XRCC6P12956 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.933e-10■□□□□ 8.4
XRCC6P12956 FKBP8-202ENST00000544835 1292 ntTSL 1 (best)19.73■□□□□ 0.754e-7■□□□□ 8.4
XRCC6P12956 FKBP8-211ENST00000601844 1548 ntTSL 519.29■□□□□ 0.684e-7■□□□□ 8.4
XRCC6P12956 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.654e-7■□□□□ 8.4
XRCC6P12956 FKBP8-204ENST00000596015 612 ntTSL 318.93■□□□□ 0.624e-7■□□□□ 8.4
XRCC6P12956 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.584e-7■□□□□ 8.4
XRCC6P12956 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.534e-7■□□□□ 8.4
XRCC6P12956 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.514e-7■□□□□ 8.4
XRCC6P12956 RBBP6-210ENST00000568015 695 ntTSL 318.04■□□□□ 0.484e-7■□□□□ 8.4
XRCC6P12956 KIF22-209ENST00000569636 834 ntTSL 517.87■□□□□ 0.454e-7■□□□□ 8.4
XRCC6P12956 RANBP1-206ENST00000421656 333 ntTSL 317.76■□□□□ 0.433e-10■□□□□ 8.4
XRCC6P12956 RANBP1-214ENST00000488484 699 ntTSL 217.05■□□□□ 0.323e-10■□□□□ 8.4
XRCC6P12956 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.254e-7■□□□□ 8.4
XRCC6P12956 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.244e-7■□□□□ 8.4
XRCC6P12956 FKBP8-212ENST00000606531 460 ntTSL 216.33■□□□□ 0.24e-7■□□□□ 8.4
XRCC6P12956 RANBP1-209ENST00000432879 744 ntTSL 316.08■□□□□ 0.163e-10■□□□□ 8.4
XRCC6P12956 INTS11-227ENST00000525603 738 ntTSL 316.03■□□□□ 0.162e-13■□□□□ 8.4
XRCC6P12956 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC15.77■□□□□ 0.124e-7■□□□□ 8.4
XRCC6P12956 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.14e-7■□□□□ 8.4
XRCC6P12956 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.62■□□□□ 0.094e-7■□□□□ 8.4
XRCC6P12956 DDB1-224ENST00000545894 2282 ntTSL 214.39□□□□□ -0.114e-7■□□□□ 8.4
XRCC6P12956 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.114e-7■□□□□ 8.4
XRCC6P12956 SEC16A-209ENST00000472305 537 ntTSL 314.34□□□□□ -0.114e-7■□□□□ 8.4
XRCC6P12956 SEC16A-207ENST00000453963 4834 ntAPPRIS ALT2 TSL 1 (best)14.13□□□□□ -0.154e-7■□□□□ 8.4
Retrieved 100 of 6,788 protein–RNA pairs in 68.9 ms