Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PEPDP12955 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PEPDP12955 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
PEPDP12955 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PEPDP12955 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.61■□□□□ 0.57
PEPDP12955 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PEPDP12955 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PEPDP12955 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PEPDP12955 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PEPDP12955 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PEPDP12955 AL355802.2-201ENST00000402069 882 ntBASIC18.61■□□□□ 0.57
PEPDP12955 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.61■□□□□ 0.57
PEPDP12955 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PEPDP12955 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.61■□□□□ 0.57
PEPDP12955 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PEPDP12955 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.61■□□□□ 0.57
PEPDP12955 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PEPDP12955 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PEPDP12955 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PEPDP12955 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PEPDP12955 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PEPDP12955 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PEPDP12955 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
PEPDP12955 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.6■□□□□ 0.57
PEPDP12955 FP700111.2-201ENST00000619190 1892 ntBASIC18.6■□□□□ 0.57
PEPDP12955 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PEPDP12955 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.6■□□□□ 0.57
PEPDP12955 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PEPDP12955 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PEPDP12955 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PEPDP12955 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PEPDP12955 GUSBP6-202ENST00000438529 1198 ntBASIC18.6■□□□□ 0.57
PEPDP12955 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.6■□□□□ 0.57
PEPDP12955 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.6■□□□□ 0.57
PEPDP12955 AC100791.3-201ENST00000617619 330 ntBASIC18.6■□□□□ 0.57
PEPDP12955 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.6■□□□□ 0.57
PEPDP12955 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PEPDP12955 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.6■□□□□ 0.57
PEPDP12955 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PEPDP12955 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PEPDP12955 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.6■□□□□ 0.57
PEPDP12955 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.6■□□□□ 0.57
PEPDP12955 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PEPDP12955 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PEPDP12955 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PEPDP12955 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEPDP12955 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PEPDP12955 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PEPDP12955 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PEPDP12955 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEPDP12955 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PEPDP12955 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.59■□□□□ 0.57
PEPDP12955 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEPDP12955 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PEPDP12955 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PEPDP12955 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEPDP12955 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEPDP12955 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PEPDP12955 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.59■□□□□ 0.57
PEPDP12955 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEPDP12955 AC093787.1-201ENST00000450396 207 ntBASIC18.59■□□□□ 0.57
PEPDP12955 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.59■□□□□ 0.57
PEPDP12955 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
PEPDP12955 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.59■□□□□ 0.57
PEPDP12955 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PEPDP12955 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PEPDP12955 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEPDP12955 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEPDP12955 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEPDP12955 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PEPDP12955 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.59■□□□□ 0.57
PEPDP12955 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.59■□□□□ 0.57
PEPDP12955 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
PEPDP12955 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PEPDP12955 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PEPDP12955 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEPDP12955 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PEPDP12955 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PEPDP12955 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
PEPDP12955 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
PEPDP12955 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.58■□□□□ 0.57
PEPDP12955 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.58■□□□□ 0.57
PEPDP12955 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
PEPDP12955 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PEPDP12955 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PEPDP12955 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PEPDP12955 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PEPDP12955 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PEPDP12955 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.58■□□□□ 0.56
PEPDP12955 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PEPDP12955 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.58■□□□□ 0.56
PEPDP12955 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.58■□□□□ 0.56
PEPDP12955 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.58■□□□□ 0.56
PEPDP12955 AC142086.2-201ENST00000569753 217 ntBASIC18.58■□□□□ 0.56
PEPDP12955 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.58■□□□□ 0.56
PEPDP12955 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.58■□□□□ 0.56
PEPDP12955 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PEPDP12955 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PEPDP12955 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PEPDP12955 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms