Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THRAP10827 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
THRAP10827 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.19■□□□□ 0.82
THRAP10827 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THRAP10827 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
THRAP10827 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
THRAP10827 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
THRAP10827 AC027702.1-201ENST00000563810 1770 ntBASIC20.18■□□□□ 0.82
THRAP10827 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.18■□□□□ 0.82
THRAP10827 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.18■□□□□ 0.82
THRAP10827 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.18■□□□□ 0.82
THRAP10827 PCDHAC2-203ENST00000615316 3011 ntBASIC20.18■□□□□ 0.82
THRAP10827 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
THRAP10827 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.18■□□□□ 0.82
THRAP10827 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
THRAP10827 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
THRAP10827 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
THRAP10827 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.18■□□□□ 0.82
THRAP10827 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.18■□□□□ 0.82
THRAP10827 AL162412.1-201ENST00000567129 965 ntBASIC20.18■□□□□ 0.82
THRAP10827 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
THRAP10827 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
THRAP10827 AC121338.2-201ENST00000622535 1744 ntBASIC20.18■□□□□ 0.82
THRAP10827 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
THRAP10827 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
THRAP10827 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.18■□□□□ 0.82
THRAP10827 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
THRAP10827 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
THRAP10827 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.18■□□□□ 0.82
THRAP10827 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
THRAP10827 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
THRAP10827 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
THRAP10827 AC020907.5-201ENST00000624372 1936 ntBASIC20.17■□□□□ 0.82
THRAP10827 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.17■□□□□ 0.82
THRAP10827 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
THRAP10827 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.17■□□□□ 0.82
THRAP10827 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
THRAP10827 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
THRAP10827 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.17■□□□□ 0.82
THRAP10827 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
THRAP10827 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
THRAP10827 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
THRAP10827 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
THRAP10827 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
THRAP10827 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
THRAP10827 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.17■□□□□ 0.82
THRAP10827 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
THRAP10827 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.17■□□□□ 0.82
THRAP10827 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
THRAP10827 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.17■□□□□ 0.82
THRAP10827 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.17■□□□□ 0.82
THRAP10827 MIR4651-201ENST00000582622 73 ntBASIC20.17■□□□□ 0.82
THRAP10827 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
THRAP10827 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
THRAP10827 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
THRAP10827 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
THRAP10827 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
THRAP10827 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
THRAP10827 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
THRAP10827 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.16■□□□□ 0.82
THRAP10827 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.16■□□□□ 0.82
THRAP10827 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.16■□□□□ 0.82
THRAP10827 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.16■□□□□ 0.82
THRAP10827 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
THRAP10827 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
THRAP10827 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.16■□□□□ 0.82
THRAP10827 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.16■□□□□ 0.82
THRAP10827 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.16■□□□□ 0.82
THRAP10827 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.16■□□□□ 0.82
THRAP10827 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.16■□□□□ 0.82
THRAP10827 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.16■□□□□ 0.82
THRAP10827 AL591742.1-201ENST00000604433 565 ntBASIC20.16■□□□□ 0.82
THRAP10827 AC092118.2-201ENST00000613495 667 ntBASIC20.16■□□□□ 0.82
THRAP10827 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.16■□□□□ 0.82
THRAP10827 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.15■□□□□ 0.82
THRAP10827 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
THRAP10827 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
THRAP10827 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
THRAP10827 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
THRAP10827 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.15■□□□□ 0.82
THRAP10827 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.15■□□□□ 0.82
THRAP10827 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.15■□□□□ 0.82
THRAP10827 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.15■□□□□ 0.82
THRAP10827 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.15■□□□□ 0.82
THRAP10827 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
THRAP10827 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
THRAP10827 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
THRAP10827 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.15■□□□□ 0.82
THRAP10827 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
THRAP10827 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
THRAP10827 AC007225.1-201ENST00000566331 1836 ntBASIC20.15■□□□□ 0.82
THRAP10827 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
THRAP10827 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
THRAP10827 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
THRAP10827 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
THRAP10827 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
THRAP10827 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
THRAP10827 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
THRAP10827 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
THRAP10827 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms