Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD48P09326 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CD48P09326 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD48P09326 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD48P09326 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CD48P09326 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CD48P09326 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.93■□□□□ 0.94
CD48P09326 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CD48P09326 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.93■□□□□ 0.94
CD48P09326 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.93■□□□□ 0.94
CD48P09326 CYP2T3P-201ENST00000601990 817 ntBASIC20.93■□□□□ 0.94
CD48P09326 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.93■□□□□ 0.94
CD48P09326 RAP2CP1-201ENST00000605103 478 ntBASIC20.93■□□□□ 0.94
CD48P09326 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CD48P09326 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CD48P09326 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CD48P09326 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CD48P09326 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.93■□□□□ 0.94
CD48P09326 AC010980.2-201ENST00000587099 1412 ntBASIC20.93■□□□□ 0.94
CD48P09326 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CD48P09326 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CD48P09326 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD48P09326 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CD48P09326 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CD48P09326 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CD48P09326 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD48P09326 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CD48P09326 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD48P09326 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD48P09326 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CD48P09326 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CD48P09326 KRT18P68-201ENST00000392293 1000 ntBASIC20.92■□□□□ 0.94
CD48P09326 AC105020.6-201ENST00000621523 1217 ntBASIC20.92■□□□□ 0.94
CD48P09326 AC008694.1-202ENST00000636953 945 ntBASIC20.92■□□□□ 0.94
CD48P09326 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CD48P09326 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD48P09326 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD48P09326 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD48P09326 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD48P09326 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD48P09326 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.92■□□□□ 0.94
CD48P09326 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
CD48P09326 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CD48P09326 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.91■□□□□ 0.94
CD48P09326 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD48P09326 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD48P09326 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD48P09326 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD48P09326 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.91■□□□□ 0.94
CD48P09326 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD48P09326 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.91■□□□□ 0.94
CD48P09326 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.91■□□□□ 0.94
CD48P09326 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.91■□□□□ 0.94
CD48P09326 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD48P09326 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.91■□□□□ 0.94
CD48P09326 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.91■□□□□ 0.94
CD48P09326 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.91■□□□□ 0.94
CD48P09326 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD48P09326 OR10C1-204ENST00000622521 1039 ntBASIC20.91■□□□□ 0.94
CD48P09326 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.91■□□□□ 0.94
CD48P09326 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.9■□□□□ 0.94
CD48P09326 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD48P09326 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD48P09326 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.9■□□□□ 0.94
CD48P09326 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD48P09326 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD48P09326 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CD48P09326 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.9■□□□□ 0.94
CD48P09326 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.9■□□□□ 0.94
CD48P09326 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD48P09326 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD48P09326 AL691432.2-201ENST00000607222 2038 ntBASIC20.9■□□□□ 0.94
CD48P09326 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD48P09326 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CD48P09326 PTBP1P-201ENST00000554374 1601 ntBASIC20.89■□□□□ 0.94
CD48P09326 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CD48P09326 KRT17P1-201ENST00000399211 1546 ntBASIC20.89■□□□□ 0.94
CD48P09326 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CD48P09326 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CD48P09326 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CD48P09326 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CD48P09326 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CD48P09326 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD48P09326 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.89■□□□□ 0.93
CD48P09326 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.89■□□□□ 0.93
CD48P09326 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.89■□□□□ 0.93
CD48P09326 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD48P09326 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CD48P09326 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD48P09326 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD48P09326 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD48P09326 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CD48P09326 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.88■□□□□ 0.93
CD48P09326 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD48P09326 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD48P09326 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.88■□□□□ 0.93
CD48P09326 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.88■□□□□ 0.93
CD48P09326 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.88■□□□□ 0.93
CD48P09326 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD48P09326 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms