Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 AP001160.3-201ENST00000601484 763 ntBASIC18.06■□□□□ 0.48
MRPL3P09001 AL139246.5-201ENST00000606645 996 ntBASIC18.06■□□□□ 0.48
MRPL3P09001 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRPL3P09001 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
MRPL3P09001 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
MRPL3P09001 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
MRPL3P09001 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRPL3P09001 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.06■□□□□ 0.48
MRPL3P09001 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRPL3P09001 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRPL3P09001 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.06■□□□□ 0.48
MRPL3P09001 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRPL3P09001 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRPL3P09001 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRPL3P09001 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRPL3P09001 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
MRPL3P09001 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MRPL3P09001 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MRPL3P09001 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MRPL3P09001 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.05■□□□□ 0.48
MRPL3P09001 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MRPL3P09001 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.05■□□□□ 0.48
MRPL3P09001 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
MRPL3P09001 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MRPL3P09001 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
MRPL3P09001 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.05■□□□□ 0.48
MRPL3P09001 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
MRPL3P09001 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MRPL3P09001 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MRPL3P09001 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
MRPL3P09001 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MRPL3P09001 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.05■□□□□ 0.48
MRPL3P09001 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.05■□□□□ 0.48
MRPL3P09001 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
MRPL3P09001 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
MRPL3P09001 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
MRPL3P09001 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MRPL3P09001 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MRPL3P09001 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
MRPL3P09001 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MRPL3P09001 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRPL3P09001 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRPL3P09001 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MRPL3P09001 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MRPL3P09001 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRPL3P09001 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.04■□□□□ 0.48
MRPL3P09001 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRPL3P09001 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MRPL3P09001 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRPL3P09001 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRPL3P09001 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.04■□□□□ 0.48
MRPL3P09001 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRPL3P09001 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MRPL3P09001 AC105265.2-201ENST00000467189 838 ntBASIC18.04■□□□□ 0.48
MRPL3P09001 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.04■□□□□ 0.48
MRPL3P09001 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.04■□□□□ 0.48
MRPL3P09001 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.04■□□□□ 0.48
MRPL3P09001 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.04■□□□□ 0.48
MRPL3P09001 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRPL3P09001 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MRPL3P09001 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.04■□□□□ 0.48
MRPL3P09001 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
MRPL3P09001 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.04■□□□□ 0.48
MRPL3P09001 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.04■□□□□ 0.48
MRPL3P09001 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRPL3P09001 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRPL3P09001 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.03■□□□□ 0.48
MRPL3P09001 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRPL3P09001 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRPL3P09001 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MRPL3P09001 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
MRPL3P09001 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.03■□□□□ 0.48
MRPL3P09001 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
MRPL3P09001 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MRPL3P09001 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRPL3P09001 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MRPL3P09001 AC027612.3-201ENST00000413684 1047 ntBASIC18.03■□□□□ 0.48
MRPL3P09001 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.03■□□□□ 0.48
MRPL3P09001 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.03■□□□□ 0.48
MRPL3P09001 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.03■□□□□ 0.48
MRPL3P09001 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.03■□□□□ 0.48
MRPL3P09001 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
MRPL3P09001 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRPL3P09001 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.03■□□□□ 0.48
MRPL3P09001 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MRPL3P09001 LINC02228-203ENST00000641970 1355 ntBASIC18.03■□□□□ 0.48
MRPL3P09001 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MRPL3P09001 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
MRPL3P09001 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.02■□□□□ 0.48
MRPL3P09001 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
MRPL3P09001 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
MRPL3P09001 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
MRPL3P09001 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MRPL3P09001 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MRPL3P09001 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
MRPL3P09001 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.02■□□□□ 0.48
MRPL3P09001 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
MRPL3P09001 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.02■□□□□ 0.48
MRPL3P09001 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
MRPL3P09001 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms