Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RHOP08100 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.01■□□□□ 0.95
RHOP08100 MIR1224-201ENST00000408193 85 ntBASIC21.01■□□□□ 0.95
RHOP08100 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.01■□□□□ 0.95
RHOP08100 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.01■□□□□ 0.95
RHOP08100 AF186192.3-201ENST00000583427 947 ntBASIC21.01■□□□□ 0.95
RHOP08100 AC026471.5-201ENST00000615068 467 ntBASIC21.01■□□□□ 0.95
RHOP08100 AL121906.2-201ENST00000621597 723 ntBASIC21.01■□□□□ 0.95
RHOP08100 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RHOP08100 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RHOP08100 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.01■□□□□ 0.95
RHOP08100 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
RHOP08100 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RHOP08100 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RHOP08100 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RHOP08100 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RHOP08100 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RHOP08100 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
RHOP08100 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21■□□□□ 0.95
RHOP08100 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21■□□□□ 0.95
RHOP08100 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21■□□□□ 0.95
RHOP08100 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21■□□□□ 0.95
RHOP08100 F2R-202ENST00000505600 442 ntTSL 2 BASIC21■□□□□ 0.95
RHOP08100 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RHOP08100 KRT18P21-201ENST00000515767 1272 ntBASIC21■□□□□ 0.95
RHOP08100 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21■□□□□ 0.95
RHOP08100 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21■□□□□ 0.95
RHOP08100 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
RHOP08100 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RHOP08100 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RHOP08100 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21■□□□□ 0.95
RHOP08100 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RHOP08100 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RHOP08100 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RHOP08100 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RHOP08100 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RHOP08100 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RHOP08100 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.99■□□□□ 0.95
RHOP08100 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RHOP08100 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RHOP08100 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RHOP08100 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.99■□□□□ 0.95
RHOP08100 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.99■□□□□ 0.95
RHOP08100 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.99■□□□□ 0.95
RHOP08100 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.99■□□□□ 0.95
RHOP08100 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RHOP08100 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RHOP08100 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RHOP08100 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RHOP08100 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.99■□□□□ 0.95
RHOP08100 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RHOP08100 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RHOP08100 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RHOP08100 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RHOP08100 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.98■□□□□ 0.95
RHOP08100 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RHOP08100 AL353807.1-201ENST00000427475 662 ntBASIC20.98■□□□□ 0.95
RHOP08100 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.98■□□□□ 0.95
RHOP08100 AP003071.4-201ENST00000562276 1284 ntBASIC20.98■□□□□ 0.95
RHOP08100 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RHOP08100 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RHOP08100 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RHOP08100 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RHOP08100 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.98■□□□□ 0.95
RHOP08100 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RHOP08100 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.97■□□□□ 0.95
RHOP08100 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RHOP08100 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHOP08100 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RHOP08100 EP400NL-214ENST00000641289 2402 ntBASIC20.97■□□□□ 0.95
RHOP08100 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
RHOP08100 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHOP08100 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHOP08100 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHOP08100 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RHOP08100 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RHOP08100 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.97■□□□□ 0.95
RHOP08100 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.97■□□□□ 0.95
RHOP08100 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.97■□□□□ 0.95
RHOP08100 CD177P1-201ENST00000606252 935 ntBASIC20.97■□□□□ 0.95
RHOP08100 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHOP08100 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHOP08100 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RHOP08100 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHOP08100 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RHOP08100 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RHOP08100 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RHOP08100 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RHOP08100 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RHOP08100 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RHOP08100 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RHOP08100 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.96■□□□□ 0.95
RHOP08100 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RHOP08100 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.96■□□□□ 0.95
RHOP08100 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RHOP08100 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RHOP08100 AL355355.2-201ENST00000442321 338 ntBASIC20.96■□□□□ 0.95
RHOP08100 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RHOP08100 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.96■□□□□ 0.95
RHOP08100 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms