Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC24.17■■□□□ 1.46
APPP05067 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
APPP05067 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
APPP05067 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
APPP05067 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
APPP05067 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
APPP05067 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
APPP05067 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
APPP05067 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC24.16■■□□□ 1.46
APPP05067 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
APPP05067 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
APPP05067 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
APPP05067 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
APPP05067 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
APPP05067 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
APPP05067 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC24.16■■□□□ 1.46
APPP05067 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC24.16■■□□□ 1.46
APPP05067 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
APPP05067 HLA-B-256ENST00000639848 1089 ntBASIC24.16■■□□□ 1.46
APPP05067 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
APPP05067 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
APPP05067 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
APPP05067 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
APPP05067 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
APPP05067 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.15■■□□□ 1.46
APPP05067 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC24.15■■□□□ 1.46
APPP05067 AC092720.2-201ENST00000602388 1665 ntBASIC24.15■■□□□ 1.46
APPP05067 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
APPP05067 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
APPP05067 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC24.15■■□□□ 1.46
APPP05067 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
APPP05067 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
APPP05067 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC24.15■■□□□ 1.46
APPP05067 MIR4651-201ENST00000582622 73 ntBASIC24.15■■□□□ 1.46
APPP05067 AC060766.5-201ENST00000590539 871 ntBASIC24.15■■□□□ 1.46
APPP05067 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
APPP05067 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC24.15■■□□□ 1.46
APPP05067 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.15■■□□□ 1.46
APPP05067 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
APPP05067 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
APPP05067 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
APPP05067 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
APPP05067 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC24.14■■□□□ 1.46
APPP05067 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
APPP05067 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
APPP05067 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
APPP05067 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
APPP05067 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
APPP05067 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC24.14■■□□□ 1.45
APPP05067 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
APPP05067 TSPY20P-201ENST00000450910 630 ntBASIC24.14■■□□□ 1.45
APPP05067 SERP1-205ENST00000487153 657 ntTSL 4 BASIC24.14■■□□□ 1.45
APPP05067 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC24.14■■□□□ 1.45
APPP05067 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.14■■□□□ 1.45
APPP05067 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC24.14■■□□□ 1.45
APPP05067 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
APPP05067 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
APPP05067 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
APPP05067 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
APPP05067 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
APPP05067 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC24.13■■□□□ 1.45
APPP05067 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
APPP05067 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
APPP05067 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
APPP05067 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
APPP05067 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC24.13■■□□□ 1.45
APPP05067 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
APPP05067 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.13■■□□□ 1.45
APPP05067 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
APPP05067 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
APPP05067 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
APPP05067 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
APPP05067 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
APPP05067 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
APPP05067 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC24.13■■□□□ 1.45
APPP05067 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
APPP05067 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
APPP05067 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
APPP05067 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC24.12■■□□□ 1.45
APPP05067 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
APPP05067 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
APPP05067 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
APPP05067 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
APPP05067 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
APPP05067 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC24.12■■□□□ 1.45
APPP05067 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
APPP05067 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
APPP05067 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC24.12■■□□□ 1.45
APPP05067 PNMA6B-201ENST00000538162 1200 ntBASIC24.12■■□□□ 1.45
APPP05067 REXO2-208ENST00000539754 791 ntTSL 2 BASIC24.12■■□□□ 1.45
APPP05067 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC24.12■■□□□ 1.45
APPP05067 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
APPP05067 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.12■■□□□ 1.45
APPP05067 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
APPP05067 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC24.12■■□□□ 1.45
APPP05067 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
APPP05067 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
APPP05067 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.12■■□□□ 1.45
APPP05067 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
APPP05067 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms