Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPNS1P04632 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPNS1P04632 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CAPNS1P04632 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.05■□□□□ 0.8
CAPNS1P04632 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPNS1P04632 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CAPNS1P04632 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPNS1P04632 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.04■□□□□ 0.8
CAPNS1P04632 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.04■□□□□ 0.8
CAPNS1P04632 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPNS1P04632 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
CAPNS1P04632 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CAPNS1P04632 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CAPNS1P04632 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.04■□□□□ 0.8
CAPNS1P04632 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPNS1P04632 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CAPNS1P04632 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.04■□□□□ 0.8
CAPNS1P04632 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CAPNS1P04632 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.04■□□□□ 0.8
CAPNS1P04632 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.04■□□□□ 0.8
CAPNS1P04632 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.04■□□□□ 0.8
CAPNS1P04632 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.04■□□□□ 0.8
CAPNS1P04632 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CAPNS1P04632 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CAPNS1P04632 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPNS1P04632 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.04■□□□□ 0.8
CAPNS1P04632 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.04■□□□□ 0.8
CAPNS1P04632 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CAPNS1P04632 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.04■□□□□ 0.8
CAPNS1P04632 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CAPNS1P04632 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPNS1P04632 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.03■□□□□ 0.8
CAPNS1P04632 AL049796.1-201ENST00000565336 1766 ntBASIC20.03■□□□□ 0.8
CAPNS1P04632 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPNS1P04632 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.03■□□□□ 0.8
CAPNS1P04632 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPNS1P04632 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
CAPNS1P04632 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CAPNS1P04632 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPNS1P04632 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.03■□□□□ 0.8
CAPNS1P04632 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CAPNS1P04632 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CAPNS1P04632 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CAPNS1P04632 AC233263.1-201ENST00000578059 224 ntBASIC20.03■□□□□ 0.8
CAPNS1P04632 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.03■□□□□ 0.8
CAPNS1P04632 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.03■□□□□ 0.8
CAPNS1P04632 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CAPNS1P04632 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.03■□□□□ 0.8
CAPNS1P04632 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPNS1P04632 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.03■□□□□ 0.8
CAPNS1P04632 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.03■□□□□ 0.8
CAPNS1P04632 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPNS1P04632 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CAPNS1P04632 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CAPNS1P04632 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CAPNS1P04632 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.02■□□□□ 0.8
CAPNS1P04632 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CAPNS1P04632 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CAPNS1P04632 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CAPNS1P04632 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CAPNS1P04632 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.02■□□□□ 0.8
CAPNS1P04632 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.02■□□□□ 0.8
CAPNS1P04632 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.02■□□□□ 0.8
CAPNS1P04632 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CAPNS1P04632 AC233702.5-201ENST00000584107 538 ntBASIC20.02■□□□□ 0.8
CAPNS1P04632 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.02■□□□□ 0.8
CAPNS1P04632 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
CAPNS1P04632 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CAPNS1P04632 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.02■□□□□ 0.8
CAPNS1P04632 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
CAPNS1P04632 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.02■□□□□ 0.79
CAPNS1P04632 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CAPNS1P04632 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CAPNS1P04632 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CAPNS1P04632 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPNS1P04632 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.01■□□□□ 0.79
CAPNS1P04632 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.01■□□□□ 0.79
CAPNS1P04632 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPNS1P04632 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPNS1P04632 AC012618.2-201ENST00000428058 849 ntBASIC20.01■□□□□ 0.79
CAPNS1P04632 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPNS1P04632 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.01■□□□□ 0.79
CAPNS1P04632 AC133561.5-201ENST00000635547 218 ntBASIC20.01■□□□□ 0.79
CAPNS1P04632 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPNS1P04632 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPNS1P04632 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPNS1P04632 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CAPNS1P04632 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.01■□□□□ 0.79
CAPNS1P04632 RBM17P2-201ENST00000616397 1405 ntBASIC20.01■□□□□ 0.79
CAPNS1P04632 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20■□□□□ 0.79
CAPNS1P04632 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20■□□□□ 0.79
CAPNS1P04632 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CAPNS1P04632 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CAPNS1P04632 LSM12P1-201ENST00000411836 588 ntBASIC20■□□□□ 0.79
CAPNS1P04632 AC087499.1-201ENST00000418141 1075 ntBASIC20■□□□□ 0.79
CAPNS1P04632 KRT17P3-201ENST00000420566 1262 ntBASIC20■□□□□ 0.79
CAPNS1P04632 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20■□□□□ 0.79
CAPNS1P04632 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20■□□□□ 0.79
CAPNS1P04632 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CAPNS1P04632 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms