Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
KDM4BO94953 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
KDM4BO94953 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KDM4BO94953 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KDM4BO94953 AC105265.2-201ENST00000467189 838 ntBASIC17.65■□□□□ 0.42
KDM4BO94953 AC079140.4-201ENST00000507448 529 ntBASIC17.65■□□□□ 0.42
KDM4BO94953 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
KDM4BO94953 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.65■□□□□ 0.42
KDM4BO94953 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KDM4BO94953 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KDM4BO94953 AC061975.6-201ENST00000579045 1553 ntBASIC17.65■□□□□ 0.42
KDM4BO94953 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.65■□□□□ 0.42
KDM4BO94953 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
KDM4BO94953 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KDM4BO94953 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
KDM4BO94953 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
KDM4BO94953 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
KDM4BO94953 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.65■□□□□ 0.42
KDM4BO94953 AC090340.1-201ENST00000620778 4980 ntBASIC17.65■□□□□ 0.42
KDM4BO94953 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
KDM4BO94953 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
KDM4BO94953 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.42
KDM4BO94953 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
KDM4BO94953 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
KDM4BO94953 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
KDM4BO94953 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
KDM4BO94953 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
KDM4BO94953 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
KDM4BO94953 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KDM4BO94953 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KDM4BO94953 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KDM4BO94953 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.64■□□□□ 0.41
KDM4BO94953 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KDM4BO94953 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KDM4BO94953 AC027612.3-201ENST00000413684 1047 ntBASIC17.64■□□□□ 0.41
KDM4BO94953 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.64■□□□□ 0.41
KDM4BO94953 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.64■□□□□ 0.41
KDM4BO94953 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KDM4BO94953 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.64■□□□□ 0.41
KDM4BO94953 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KDM4BO94953 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KDM4BO94953 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
KDM4BO94953 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
KDM4BO94953 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KDM4BO94953 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KDM4BO94953 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KDM4BO94953 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.63■□□□□ 0.41
KDM4BO94953 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
KDM4BO94953 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KDM4BO94953 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
KDM4BO94953 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KDM4BO94953 AC008175.2-201ENST00000612840 297 ntBASIC17.63■□□□□ 0.41
KDM4BO94953 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KDM4BO94953 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KDM4BO94953 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.63■□□□□ 0.41
KDM4BO94953 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
KDM4BO94953 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.63■□□□□ 0.41
KDM4BO94953 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KDM4BO94953 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KDM4BO94953 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KDM4BO94953 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.63■□□□□ 0.41
KDM4BO94953 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KDM4BO94953 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KDM4BO94953 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KDM4BO94953 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.63■□□□□ 0.41
KDM4BO94953 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KDM4BO94953 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KDM4BO94953 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.62■□□□□ 0.41
KDM4BO94953 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.62■□□□□ 0.41
KDM4BO94953 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KDM4BO94953 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KDM4BO94953 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
KDM4BO94953 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KDM4BO94953 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KDM4BO94953 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KDM4BO94953 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KDM4BO94953 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.62■□□□□ 0.41
KDM4BO94953 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
KDM4BO94953 POU5F1P4-201ENST00000413175 1085 ntBASIC17.62■□□□□ 0.41
KDM4BO94953 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
KDM4BO94953 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.62■□□□□ 0.41
KDM4BO94953 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.62■□□□□ 0.41
KDM4BO94953 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
KDM4BO94953 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KDM4BO94953 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KDM4BO94953 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.62■□□□□ 0.41
KDM4BO94953 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KDM4BO94953 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KDM4BO94953 TCF3P1-201ENST00000423021 1937 ntBASIC17.62■□□□□ 0.41
KDM4BO94953 AC011484.1-201ENST00000377652 1995 ntBASIC17.62■□□□□ 0.41
KDM4BO94953 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.62■□□□□ 0.41
KDM4BO94953 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.62■□□□□ 0.41
KDM4BO94953 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KDM4BO94953 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.61■□□□□ 0.41
KDM4BO94953 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KDM4BO94953 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
KDM4BO94953 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.61■□□□□ 0.41
KDM4BO94953 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KDM4BO94953 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KDM4BO94953 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms