Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
LTN1O94822 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
LTN1O94822 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
LTN1O94822 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
LTN1O94822 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
LTN1O94822 FAM197Y1-201ENST00000421178 764 ntBASIC26.98■■□□□ 1.91
LTN1O94822 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
LTN1O94822 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
LTN1O94822 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC26.98■■□□□ 1.91
LTN1O94822 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
LTN1O94822 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC26.98■■□□□ 1.91
LTN1O94822 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
LTN1O94822 NIFKP9-201ENST00000419265 221 ntBASIC26.97■■□□□ 1.91
LTN1O94822 SAPCD2P4-201ENST00000424595 1171 ntBASIC26.97■■□□□ 1.91
LTN1O94822 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC26.97■■□□□ 1.91
LTN1O94822 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
LTN1O94822 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC26.97■■□□□ 1.91
LTN1O94822 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
LTN1O94822 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
LTN1O94822 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
LTN1O94822 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
LTN1O94822 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC26.97■■□□□ 1.91
LTN1O94822 F2R-202ENST00000505600 442 ntTSL 2 BASIC26.97■■□□□ 1.91
LTN1O94822 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC26.97■■□□□ 1.91
LTN1O94822 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
LTN1O94822 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LTN1O94822 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LTN1O94822 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
LTN1O94822 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LTN1O94822 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
LTN1O94822 AL390955.1-201ENST00000428694 934 ntBASIC26.96■■□□□ 1.91
LTN1O94822 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LTN1O94822 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC26.96■■□□□ 1.91
LTN1O94822 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
LTN1O94822 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC26.96■■□□□ 1.91
LTN1O94822 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC26.95■■□□□ 1.9
LTN1O94822 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC26.95■■□□□ 1.9
LTN1O94822 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
LTN1O94822 RBM17P1-201ENST00000453646 1190 ntBASIC26.95■■□□□ 1.9
LTN1O94822 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC26.95■■□□□ 1.9
LTN1O94822 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
LTN1O94822 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
LTN1O94822 H19-201ENST00000411754 1788 ntTSL 5 BASIC26.95■■□□□ 1.9
LTN1O94822 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC26.95■■□□□ 1.9
LTN1O94822 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.95■■□□□ 1.9
LTN1O94822 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC26.95■■□□□ 1.9
LTN1O94822 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
LTN1O94822 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC26.94■■□□□ 1.9
LTN1O94822 AL049796.1-201ENST00000565336 1766 ntBASIC26.94■■□□□ 1.9
LTN1O94822 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC26.94■■□□□ 1.9
LTN1O94822 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LTN1O94822 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC26.94■■□□□ 1.9
LTN1O94822 P4HB-223ENST00000576390 439 ntTSL 4 BASIC26.94■■□□□ 1.9
LTN1O94822 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC26.94■■□□□ 1.9
LTN1O94822 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
LTN1O94822 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
LTN1O94822 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
LTN1O94822 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
LTN1O94822 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC26.94■■□□□ 1.9
LTN1O94822 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC26.94■■□□□ 1.9
LTN1O94822 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LTN1O94822 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LTN1O94822 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
LTN1O94822 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LTN1O94822 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC26.94■■□□□ 1.9
LTN1O94822 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC26.94■■□□□ 1.9
LTN1O94822 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
LTN1O94822 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LTN1O94822 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LTN1O94822 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC26.94■■□□□ 1.9
LTN1O94822 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC26.94■■□□□ 1.9
LTN1O94822 AL031963.3-201ENST00000606441 850 ntBASIC26.94■■□□□ 1.9
LTN1O94822 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
LTN1O94822 KRT16P1-201ENST00000399124 1418 ntBASIC26.94■■□□□ 1.9
LTN1O94822 AC079598.2-202ENST00000546624 1451 ntBASIC26.94■■□□□ 1.9
LTN1O94822 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
LTN1O94822 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
LTN1O94822 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
LTN1O94822 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC26.93■■□□□ 1.9
LTN1O94822 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC26.93■■□□□ 1.9
LTN1O94822 AL445228.2-201ENST00000605589 952 ntBASIC26.93■■□□□ 1.9
LTN1O94822 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC26.93■■□□□ 1.9
LTN1O94822 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC26.93■■□□□ 1.9
LTN1O94822 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
LTN1O94822 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
LTN1O94822 AL117328.2-201ENST00000624617 1940 ntBASIC26.93■■□□□ 1.9
LTN1O94822 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC26.92■■□□□ 1.9
LTN1O94822 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC26.92■■□□□ 1.9
LTN1O94822 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
LTN1O94822 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC26.92■■□□□ 1.9
LTN1O94822 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC26.92■■□□□ 1.9
LTN1O94822 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC26.92■■□□□ 1.9
LTN1O94822 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC26.92■■□□□ 1.9
LTN1O94822 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC26.92■■□□□ 1.9
LTN1O94822 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
LTN1O94822 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
LTN1O94822 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC26.92■■□□□ 1.9
LTN1O94822 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC26.91■■□□□ 1.9
LTN1O94822 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.91■■□□□ 1.9
LTN1O94822 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms