Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFPL1O75677 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFPL1O75677 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RFPL1O75677 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFPL1O75677 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFPL1O75677 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFPL1O75677 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFPL1O75677 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFPL1O75677 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.22■□□□□ 0.83
RFPL1O75677 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFPL1O75677 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.22■□□□□ 0.83
RFPL1O75677 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.22■□□□□ 0.83
RFPL1O75677 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.22■□□□□ 0.83
RFPL1O75677 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RFPL1O75677 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RFPL1O75677 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFPL1O75677 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFPL1O75677 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.22■□□□□ 0.83
RFPL1O75677 MIR663A-201ENST00000385250 93 ntBASIC20.22■□□□□ 0.83
RFPL1O75677 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.22■□□□□ 0.83
RFPL1O75677 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.22■□□□□ 0.83
RFPL1O75677 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.22■□□□□ 0.83
RFPL1O75677 AC087289.5-201ENST00000586076 3175 ntBASIC20.22■□□□□ 0.83
RFPL1O75677 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFPL1O75677 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFPL1O75677 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.22■□□□□ 0.83
RFPL1O75677 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RFPL1O75677 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFPL1O75677 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFPL1O75677 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
RFPL1O75677 KRT8P36-201ENST00000489121 1440 ntBASIC20.21■□□□□ 0.83
RFPL1O75677 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
RFPL1O75677 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RFPL1O75677 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.21■□□□□ 0.83
RFPL1O75677 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFPL1O75677 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFPL1O75677 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.21■□□□□ 0.83
RFPL1O75677 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFPL1O75677 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFPL1O75677 NCF1B-203ENST00000435988 1254 ntBASIC20.21■□□□□ 0.83
RFPL1O75677 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFPL1O75677 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFPL1O75677 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.21■□□□□ 0.83
RFPL1O75677 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.21■□□□□ 0.83
RFPL1O75677 AC104187.1-201ENST00000607510 612 ntBASIC20.21■□□□□ 0.83
RFPL1O75677 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.21■□□□□ 0.83
RFPL1O75677 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFPL1O75677 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.21■□□□□ 0.83
RFPL1O75677 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFPL1O75677 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFPL1O75677 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFPL1O75677 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFPL1O75677 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.21■□□□□ 0.83
RFPL1O75677 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RFPL1O75677 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFPL1O75677 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFPL1O75677 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.2■□□□□ 0.82
RFPL1O75677 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFPL1O75677 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFPL1O75677 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
RFPL1O75677 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFPL1O75677 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RFPL1O75677 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFPL1O75677 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFPL1O75677 AL691432.2-201ENST00000607222 2038 ntBASIC20.2■□□□□ 0.82
RFPL1O75677 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFPL1O75677 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFPL1O75677 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RFPL1O75677 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFPL1O75677 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.19■□□□□ 0.82
RFPL1O75677 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RFPL1O75677 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFPL1O75677 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.19■□□□□ 0.82
RFPL1O75677 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.19■□□□□ 0.82
RFPL1O75677 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
RFPL1O75677 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFPL1O75677 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RFPL1O75677 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RFPL1O75677 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFPL1O75677 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFPL1O75677 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFPL1O75677 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RFPL1O75677 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RFPL1O75677 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFPL1O75677 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFPL1O75677 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
RFPL1O75677 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.19■□□□□ 0.82
RFPL1O75677 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFPL1O75677 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RFPL1O75677 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.19■□□□□ 0.82
RFPL1O75677 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RFPL1O75677 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFPL1O75677 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFPL1O75677 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.19■□□□□ 0.82
RFPL1O75677 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFPL1O75677 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFPL1O75677 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
RFPL1O75677 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFPL1O75677 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFPL1O75677 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms