Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TRIM3O75382 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRIM3O75382 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRIM3O75382 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM3O75382 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM3O75382 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM3O75382 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM3O75382 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM3O75382 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TRIM3O75382 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM3O75382 CYP21A1P-202ENST00000354927 1481 ntBASIC18.74■□□□□ 0.59
TRIM3O75382 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM3O75382 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TRIM3O75382 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM3O75382 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM3O75382 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM3O75382 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.74■□□□□ 0.59
TRIM3O75382 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM3O75382 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM3O75382 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TRIM3O75382 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM3O75382 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
TRIM3O75382 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM3O75382 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM3O75382 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM3O75382 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.74■□□□□ 0.59
TRIM3O75382 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM3O75382 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM3O75382 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM3O75382 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM3O75382 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.73■□□□□ 0.59
TRIM3O75382 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM3O75382 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM3O75382 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM3O75382 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM3O75382 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM3O75382 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM3O75382 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.73■□□□□ 0.59
TRIM3O75382 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.73■□□□□ 0.59
TRIM3O75382 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.73■□□□□ 0.59
TRIM3O75382 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM3O75382 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM3O75382 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
TRIM3O75382 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM3O75382 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRIM3O75382 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TRIM3O75382 KRT17P1-201ENST00000399211 1546 ntBASIC18.73■□□□□ 0.59
TRIM3O75382 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM3O75382 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
TRIM3O75382 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM3O75382 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM3O75382 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM3O75382 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TRIM3O75382 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM3O75382 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM3O75382 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM3O75382 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
TRIM3O75382 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRIM3O75382 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM3O75382 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM3O75382 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM3O75382 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM3O75382 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRIM3O75382 LSM12P1-201ENST00000411836 588 ntBASIC18.72■□□□□ 0.59
TRIM3O75382 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM3O75382 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM3O75382 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM3O75382 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRIM3O75382 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM3O75382 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM3O75382 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM3O75382 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM3O75382 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM3O75382 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM3O75382 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM3O75382 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM3O75382 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM3O75382 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM3O75382 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM3O75382 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM3O75382 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM3O75382 AC011484.1-201ENST00000377652 1995 ntBASIC18.72■□□□□ 0.59
TRIM3O75382 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM3O75382 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM3O75382 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM3O75382 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM3O75382 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.71■□□□□ 0.59
TRIM3O75382 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM3O75382 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TRIM3O75382 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM3O75382 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM3O75382 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM3O75382 KRT18P68-201ENST00000392293 1000 ntBASIC18.71■□□□□ 0.59
TRIM3O75382 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
TRIM3O75382 AC091874.3-201ENST00000512672 1195 ntBASIC18.71■□□□□ 0.59
TRIM3O75382 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM3O75382 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRIM3O75382 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.71■□□□□ 0.59
TRIM3O75382 MYC-209ENST00000641252 345 ntBASIC18.71■□□□□ 0.59
TRIM3O75382 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms