Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CPNE3O75131 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.33■□□□□ 0.68
CPNE3O75131 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CPNE3O75131 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CPNE3O75131 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE3O75131 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE3O75131 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CPNE3O75131 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE3O75131 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.32■□□□□ 0.68
CPNE3O75131 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE3O75131 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.32■□□□□ 0.68
CPNE3O75131 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CPNE3O75131 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE3O75131 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CPNE3O75131 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CPNE3O75131 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.32■□□□□ 0.68
CPNE3O75131 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.32■□□□□ 0.68
CPNE3O75131 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.32■□□□□ 0.68
CPNE3O75131 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.32■□□□□ 0.68
CPNE3O75131 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE3O75131 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE3O75131 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CPNE3O75131 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CPNE3O75131 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE3O75131 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.32■□□□□ 0.68
CPNE3O75131 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.32■□□□□ 0.68
CPNE3O75131 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE3O75131 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CPNE3O75131 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE3O75131 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CPNE3O75131 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.32■□□□□ 0.68
CPNE3O75131 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.32■□□□□ 0.68
CPNE3O75131 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE3O75131 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CPNE3O75131 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CPNE3O75131 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.32■□□□□ 0.68
CPNE3O75131 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CPNE3O75131 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE3O75131 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE3O75131 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.31■□□□□ 0.68
CPNE3O75131 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE3O75131 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.31■□□□□ 0.68
CPNE3O75131 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE3O75131 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE3O75131 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CPNE3O75131 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.31■□□□□ 0.68
CPNE3O75131 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE3O75131 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.31■□□□□ 0.68
CPNE3O75131 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.31■□□□□ 0.68
CPNE3O75131 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CPNE3O75131 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.31■□□□□ 0.68
CPNE3O75131 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.31■□□□□ 0.68
CPNE3O75131 AC011484.1-201ENST00000377652 1995 ntBASIC19.31■□□□□ 0.68
CPNE3O75131 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.31■□□□□ 0.68
CPNE3O75131 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE3O75131 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE3O75131 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.31■□□□□ 0.68
CPNE3O75131 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CPNE3O75131 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.3■□□□□ 0.68
CPNE3O75131 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE3O75131 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CPNE3O75131 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.3■□□□□ 0.68
CPNE3O75131 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.3■□□□□ 0.68
CPNE3O75131 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE3O75131 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.3■□□□□ 0.68
CPNE3O75131 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.3■□□□□ 0.68
CPNE3O75131 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.3■□□□□ 0.68
CPNE3O75131 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE3O75131 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE3O75131 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE3O75131 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CPNE3O75131 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE3O75131 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE3O75131 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE3O75131 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE3O75131 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE3O75131 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.3■□□□□ 0.68
CPNE3O75131 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.3■□□□□ 0.68
CPNE3O75131 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE3O75131 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.29■□□□□ 0.68
CPNE3O75131 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE3O75131 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.29■□□□□ 0.68
CPNE3O75131 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE3O75131 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE3O75131 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.29■□□□□ 0.68
CPNE3O75131 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.29■□□□□ 0.68
CPNE3O75131 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE3O75131 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.29■□□□□ 0.68
CPNE3O75131 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.29■□□□□ 0.68
CPNE3O75131 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.29■□□□□ 0.68
CPNE3O75131 AC069544.1-201ENST00000609399 999 ntBASIC19.29■□□□□ 0.68
CPNE3O75131 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE3O75131 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE3O75131 AC026310.3-201ENST00000625186 2373 ntBASIC19.29■□□□□ 0.68
CPNE3O75131 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE3O75131 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.29■□□□□ 0.68
CPNE3O75131 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CPNE3O75131 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CPNE3O75131 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.29■□□□□ 0.68
CPNE3O75131 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms