Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
PTCD1O75127 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
PTCD1O75127 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC26.02■■□□□ 1.76
PTCD1O75127 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PTCD1O75127 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PTCD1O75127 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PTCD1O75127 Z98882.1-201ENST00000622160 2253 ntBASIC26.02■■□□□ 1.76
PTCD1O75127 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC26.02■■□□□ 1.76
PTCD1O75127 KRT16P5-201ENST00000455284 522 ntBASIC26.02■■□□□ 1.76
PTCD1O75127 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC26.02■■□□□ 1.76
PTCD1O75127 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC26.02■■□□□ 1.76
PTCD1O75127 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC26.02■■□□□ 1.76
PTCD1O75127 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
PTCD1O75127 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC26.02■■□□□ 1.76
PTCD1O75127 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PTCD1O75127 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC26.02■■□□□ 1.76
PTCD1O75127 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PTCD1O75127 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PTCD1O75127 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PTCD1O75127 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PTCD1O75127 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PTCD1O75127 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
PTCD1O75127 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
PTCD1O75127 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC26.01■■□□□ 1.75
PTCD1O75127 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
PTCD1O75127 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC26.01■■□□□ 1.75
PTCD1O75127 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC26.01■■□□□ 1.75
PTCD1O75127 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC26.01■■□□□ 1.75
PTCD1O75127 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PTCD1O75127 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PTCD1O75127 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC26■■□□□ 1.75
PTCD1O75127 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PTCD1O75127 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
PTCD1O75127 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
PTCD1O75127 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PTCD1O75127 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC26■■□□□ 1.75
PTCD1O75127 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PTCD1O75127 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PTCD1O75127 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
PTCD1O75127 FAM197Y1-201ENST00000421178 764 ntBASIC26■■□□□ 1.75
PTCD1O75127 AL355355.2-201ENST00000442321 338 ntBASIC26■■□□□ 1.75
PTCD1O75127 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC26■■□□□ 1.75
PTCD1O75127 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC26■■□□□ 1.75
PTCD1O75127 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
PTCD1O75127 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC26■■□□□ 1.75
PTCD1O75127 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC26■■□□□ 1.75
PTCD1O75127 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC26■■□□□ 1.75
PTCD1O75127 AC012676.1-201ENST00000574705 1949 ntBASIC26■■□□□ 1.75
PTCD1O75127 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PTCD1O75127 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PTCD1O75127 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PTCD1O75127 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PTCD1O75127 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.99■■□□□ 1.75
PTCD1O75127 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PTCD1O75127 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
PTCD1O75127 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PTCD1O75127 PPOX-219ENST00000544598 813 ntTSL 2 BASIC25.99■■□□□ 1.75
PTCD1O75127 PNN-205ENST00000556530 601 ntTSL 2 BASIC25.99■■□□□ 1.75
PTCD1O75127 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
PTCD1O75127 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC25.99■■□□□ 1.75
PTCD1O75127 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
PTCD1O75127 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PTCD1O75127 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
PTCD1O75127 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PTCD1O75127 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC25.99■■□□□ 1.75
PTCD1O75127 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
PTCD1O75127 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PTCD1O75127 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.98■■□□□ 1.75
PTCD1O75127 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
PTCD1O75127 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
PTCD1O75127 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PTCD1O75127 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PTCD1O75127 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.98■■□□□ 1.75
PTCD1O75127 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PTCD1O75127 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.98■■□□□ 1.75
PTCD1O75127 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PTCD1O75127 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.98■■□□□ 1.75
PTCD1O75127 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PTCD1O75127 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC25.98■■□□□ 1.75
PTCD1O75127 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC25.98■■□□□ 1.75
PTCD1O75127 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PTCD1O75127 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PTCD1O75127 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PTCD1O75127 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PTCD1O75127 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PTCD1O75127 AL024507.2-201ENST00000606070 2574 ntBASIC25.98■■□□□ 1.75
PTCD1O75127 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
PTCD1O75127 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PTCD1O75127 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
PTCD1O75127 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.97■■□□□ 1.75
PTCD1O75127 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PTCD1O75127 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
PTCD1O75127 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC25.97■■□□□ 1.75
PTCD1O75127 STK25-234ENST00000535007 2459 ntTSL 2 BASIC25.97■■□□□ 1.75
PTCD1O75127 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PTCD1O75127 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC25.97■■□□□ 1.75
PTCD1O75127 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PTCD1O75127 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
PTCD1O75127 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC25.96■■□□□ 1.75
PTCD1O75127 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms