Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF11O60813 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PRAMEF11O60813 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF11O60813 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF11O60813 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.5■□□□□ 0.87
PRAMEF11O60813 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF11O60813 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF11O60813 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF11O60813 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF11O60813 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.5■□□□□ 0.87
PRAMEF11O60813 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF11O60813 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF11O60813 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.5■□□□□ 0.87
PRAMEF11O60813 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF11O60813 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.49■□□□□ 0.87
PRAMEF11O60813 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.49■□□□□ 0.87
PRAMEF11O60813 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF11O60813 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.49■□□□□ 0.87
PRAMEF11O60813 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF11O60813 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF11O60813 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF11O60813 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.49■□□□□ 0.87
PRAMEF11O60813 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF11O60813 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF11O60813 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.49■□□□□ 0.87
PRAMEF11O60813 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF11O60813 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.49■□□□□ 0.87
PRAMEF11O60813 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PRAMEF11O60813 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF11O60813 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF11O60813 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF11O60813 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF11O60813 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.48■□□□□ 0.87
PRAMEF11O60813 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.48■□□□□ 0.87
PRAMEF11O60813 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.48■□□□□ 0.87
PRAMEF11O60813 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PRAMEF11O60813 AC092368.3-202ENST00000574180 1591 ntBASIC20.48■□□□□ 0.87
PRAMEF11O60813 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF11O60813 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PRAMEF11O60813 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.48■□□□□ 0.87
PRAMEF11O60813 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF11O60813 PNMA6B-201ENST00000538162 1200 ntBASIC20.48■□□□□ 0.87
PRAMEF11O60813 AL031963.3-201ENST00000606441 850 ntBASIC20.48■□□□□ 0.87
PRAMEF11O60813 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.48■□□□□ 0.87
PRAMEF11O60813 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF11O60813 LINC01521-201ENST00000504184 1943 ntBASIC20.48■□□□□ 0.87
PRAMEF11O60813 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.48■□□□□ 0.87
PRAMEF11O60813 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PRAMEF11O60813 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF11O60813 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEF11O60813 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.48■□□□□ 0.87
PRAMEF11O60813 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.48■□□□□ 0.87
PRAMEF11O60813 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF11O60813 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF11O60813 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF11O60813 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF11O60813 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEF11O60813 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.47■□□□□ 0.87
PRAMEF11O60813 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEF11O60813 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEF11O60813 AC005829.2-201ENST00000571422 1056 ntBASIC20.47■□□□□ 0.87
PRAMEF11O60813 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEF11O60813 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PRAMEF11O60813 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.47■□□□□ 0.87
PRAMEF11O60813 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEF11O60813 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEF11O60813 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PRAMEF11O60813 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.46■□□□□ 0.87
PRAMEF11O60813 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF11O60813 KRT8P17-201ENST00000453110 1448 ntBASIC20.46■□□□□ 0.87
PRAMEF11O60813 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.46■□□□□ 0.87
PRAMEF11O60813 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF11O60813 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.46■□□□□ 0.87
PRAMEF11O60813 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF11O60813 RNA5SP413-201ENST00000516373 109 ntBASIC20.46■□□□□ 0.87
PRAMEF11O60813 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.46■□□□□ 0.87
PRAMEF11O60813 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF11O60813 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF11O60813 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF11O60813 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.46■□□□□ 0.87
PRAMEF11O60813 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.46■□□□□ 0.87
PRAMEF11O60813 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF11O60813 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.46■□□□□ 0.87
PRAMEF11O60813 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.46■□□□□ 0.87
PRAMEF11O60813 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEF11O60813 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF11O60813 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF11O60813 KRT8P20-201ENST00000423953 1409 ntBASIC20.45■□□□□ 0.86
PRAMEF11O60813 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.45■□□□□ 0.86
PRAMEF11O60813 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF11O60813 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF11O60813 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.45■□□□□ 0.86
PRAMEF11O60813 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF11O60813 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PRAMEF11O60813 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEF11O60813 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.45■□□□□ 0.86
PRAMEF11O60813 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.45■□□□□ 0.86
PRAMEF11O60813 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.45■□□□□ 0.86
PRAMEF11O60813 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.45■□□□□ 0.86
PRAMEF11O60813 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms