Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRAF3IP2O43734 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRAF3IP2O43734 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAF3IP2O43734 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRAF3IP2O43734 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRAF3IP2O43734 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP2O43734 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP2O43734 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP2O43734 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP2O43734 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP2O43734 GUSBP6-202ENST00000438529 1198 ntBASIC17.99■□□□□ 0.47
TRAF3IP2O43734 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.99■□□□□ 0.47
TRAF3IP2O43734 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAF3IP2O43734 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP2O43734 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.99■□□□□ 0.47
TRAF3IP2O43734 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP2O43734 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAF3IP2O43734 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP2O43734 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAF3IP2O43734 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAF3IP2O43734 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAF3IP2O43734 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAF3IP2O43734 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAF3IP2O43734 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TRAF3IP2O43734 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRAF3IP2O43734 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAF3IP2O43734 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAF3IP2O43734 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAF3IP2O43734 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.98■□□□□ 0.47
TRAF3IP2O43734 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.98■□□□□ 0.47
TRAF3IP2O43734 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAF3IP2O43734 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAF3IP2O43734 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAF3IP2O43734 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.98■□□□□ 0.47
TRAF3IP2O43734 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAF3IP2O43734 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAF3IP2O43734 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAF3IP2O43734 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAF3IP2O43734 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAF3IP2O43734 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 BX276092.2-201ENST00000417668 665 ntBASIC17.97■□□□□ 0.47
TRAF3IP2O43734 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 AC090192.1-201ENST00000517740 490 ntBASIC17.97■□□□□ 0.47
TRAF3IP2O43734 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAF3IP2O43734 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 AC099778.1-201ENST00000568593 1911 ntBASIC17.96■□□□□ 0.47
TRAF3IP2O43734 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 GPX1P1-201ENST00000388829 606 ntBASIC17.96■□□□□ 0.47
TRAF3IP2O43734 LSM12P1-201ENST00000411836 588 ntBASIC17.96■□□□□ 0.47
TRAF3IP2O43734 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 PTBP1P-201ENST00000554374 1601 ntBASIC17.96■□□□□ 0.47
TRAF3IP2O43734 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAF3IP2O43734 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP2O43734 MIPEPP3-201ENST00000412105 444 ntBASIC17.95■□□□□ 0.46
TRAF3IP2O43734 TSPY6P-201ENST00000448518 926 ntBASIC17.95■□□□□ 0.46
TRAF3IP2O43734 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms