Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.03■□□□□ 0.64
RRP8O43159 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
RRP8O43159 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RRP8O43159 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RRP8O43159 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RRP8O43159 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RRP8O43159 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RRP8O43159 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RRP8O43159 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RRP8O43159 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RRP8O43159 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RRP8O43159 ATP5G1P1-201ENST00000448724 379 ntBASIC19.02■□□□□ 0.64
RRP8O43159 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.02■□□□□ 0.64
RRP8O43159 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.02■□□□□ 0.64
RRP8O43159 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RRP8O43159 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.02■□□□□ 0.64
RRP8O43159 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.02■□□□□ 0.64
RRP8O43159 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RRP8O43159 AL356652.1-201ENST00000615962 565 ntBASIC19.02■□□□□ 0.64
RRP8O43159 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.02■□□□□ 0.64
RRP8O43159 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RRP8O43159 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.02■□□□□ 0.64
RRP8O43159 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RRP8O43159 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.02■□□□□ 0.63
RRP8O43159 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.63
RRP8O43159 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RRP8O43159 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RRP8O43159 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RRP8O43159 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RRP8O43159 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RRP8O43159 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RRP8O43159 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RRP8O43159 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.01■□□□□ 0.63
RRP8O43159 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RRP8O43159 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RRP8O43159 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.01■□□□□ 0.63
RRP8O43159 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.01■□□□□ 0.63
RRP8O43159 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RRP8O43159 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.01■□□□□ 0.63
RRP8O43159 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.01■□□□□ 0.63
RRP8O43159 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.01■□□□□ 0.63
RRP8O43159 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.01■□□□□ 0.63
RRP8O43159 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RRP8O43159 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RRP8O43159 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RRP8O43159 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RRP8O43159 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RRP8O43159 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RRP8O43159 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RRP8O43159 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RRP8O43159 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RRP8O43159 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.01■□□□□ 0.63
RRP8O43159 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RRP8O43159 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RRP8O43159 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RRP8O43159 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19■□□□□ 0.63
RRP8O43159 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RRP8O43159 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RRP8O43159 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RRP8O43159 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RRP8O43159 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RRP8O43159 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19■□□□□ 0.63
RRP8O43159 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19■□□□□ 0.63
RRP8O43159 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RRP8O43159 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19■□□□□ 0.63
RRP8O43159 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19■□□□□ 0.63
RRP8O43159 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19■□□□□ 0.63
RRP8O43159 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RRP8O43159 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RRP8O43159 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19■□□□□ 0.63
RRP8O43159 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RRP8O43159 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19■□□□□ 0.63
RRP8O43159 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RRP8O43159 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19■□□□□ 0.63
RRP8O43159 AC073508.3-201ENST00000619697 1419 ntBASIC19■□□□□ 0.63
RRP8O43159 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RRP8O43159 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RRP8O43159 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RRP8O43159 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RRP8O43159 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RRP8O43159 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RRP8O43159 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.99■□□□□ 0.63
RRP8O43159 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RRP8O43159 AC104076.2-201ENST00000448912 469 ntBASIC18.99■□□□□ 0.63
RRP8O43159 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.99■□□□□ 0.63
RRP8O43159 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.99■□□□□ 0.63
RRP8O43159 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.99■□□□□ 0.63
RRP8O43159 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.99■□□□□ 0.63
RRP8O43159 FITM1-202ENST00000559294 800 ntBASIC18.99■□□□□ 0.63
RRP8O43159 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RRP8O43159 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RRP8O43159 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.99■□□□□ 0.63
RRP8O43159 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RRP8O43159 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RRP8O43159 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
RRP8O43159 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.98■□□□□ 0.63
RRP8O43159 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RRP8O43159 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RRP8O43159 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.98■□□□□ 0.63
RRP8O43159 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms