Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AL359075.1-203ENST00000462729 1002 ntBASIC33.09■■■□□ 2.89
CHD1O14646 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC33.09■■■□□ 2.89
CHD1O14646 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC33.09■■■□□ 2.89
CHD1O14646 AC139887.4-201ENST00000607877 719 ntBASIC33.09■■■□□ 2.89
CHD1O14646 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC33.09■■■□□ 2.89
CHD1O14646 FAM99A-202ENST00000538190 1989 ntBASIC33.09■■■□□ 2.89
CHD1O14646 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CHD1O14646 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CHD1O14646 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CHD1O14646 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CHD1O14646 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC33.08■■■□□ 2.89
CHD1O14646 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CHD1O14646 AL138966.2-201ENST00000621997 464 ntBASIC33.08■■■□□ 2.89
CHD1O14646 FSCN1P1-201ENST00000568912 1481 ntBASIC33.08■■■□□ 2.89
CHD1O14646 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CHD1O14646 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CHD1O14646 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CHD1O14646 ANKRD20A18P-201ENST00000359341 492 ntBASIC33.08■■■□□ 2.89
CHD1O14646 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CHD1O14646 RNF152P1-201ENST00000397754 604 ntBASIC33.08■■■□□ 2.89
CHD1O14646 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC33.08■■■□□ 2.89
CHD1O14646 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC33.08■■■□□ 2.89
CHD1O14646 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.89
CHD1O14646 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC33.07■■■□□ 2.88
CHD1O14646 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC33.07■■■□□ 2.88
CHD1O14646 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC33.07■■■□□ 2.88
CHD1O14646 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
CHD1O14646 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CHD1O14646 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC33.06■■■□□ 2.88
CHD1O14646 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC33.06■■■□□ 2.88
CHD1O14646 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC33.06■■■□□ 2.88
CHD1O14646 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC33.06■■■□□ 2.88
CHD1O14646 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
CHD1O14646 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC33.06■■■□□ 2.88
CHD1O14646 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
CHD1O14646 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC33.06■■■□□ 2.88
CHD1O14646 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC33.05■■■□□ 2.88
CHD1O14646 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CHD1O14646 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC33.05■■■□□ 2.88
CHD1O14646 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CHD1O14646 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC33.05■■■□□ 2.88
CHD1O14646 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CHD1O14646 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC33.05■■■□□ 2.88
CHD1O14646 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC33.05■■■□□ 2.88
CHD1O14646 BX664615.1-201ENST00000443558 458 ntBASIC33.05■■■□□ 2.88
CHD1O14646 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC33.05■■■□□ 2.88
CHD1O14646 CD81-212ENST00000526072 1172 ntTSL 5 BASIC33.05■■■□□ 2.88
CHD1O14646 GRAMD4P8-201ENST00000605465 1115 ntBASIC33.05■■■□□ 2.88
CHD1O14646 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC33.04■■■□□ 2.88
CHD1O14646 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
CHD1O14646 EXOC3-AS1-202ENST00000623673 1663 ntBASIC33.04■■■□□ 2.88
CHD1O14646 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
CHD1O14646 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
CHD1O14646 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC33.04■■■□□ 2.88
CHD1O14646 PPP1R14BP5-201ENST00000440334 435 ntBASIC33.04■■■□□ 2.88
CHD1O14646 AC083849.1-201ENST00000615227 514 ntBASIC33.04■■■□□ 2.88
CHD1O14646 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC33.04■■■□□ 2.88
CHD1O14646 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC33.04■■■□□ 2.88
CHD1O14646 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC33.03■■■□□ 2.88
CHD1O14646 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC33.03■■■□□ 2.88
CHD1O14646 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
CHD1O14646 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC33.03■■■□□ 2.88
CHD1O14646 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC33.03■■■□□ 2.88
CHD1O14646 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CHD1O14646 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CHD1O14646 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC33.02■■■□□ 2.88
CHD1O14646 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CHD1O14646 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CHD1O14646 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC33.02■■■□□ 2.88
CHD1O14646 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC33.02■■■□□ 2.88
CHD1O14646 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC33.02■■■□□ 2.88
CHD1O14646 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
CHD1O14646 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC33.02■■■□□ 2.88
CHD1O14646 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC33.02■■■□□ 2.88
CHD1O14646 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC33.02■■■□□ 2.88
CHD1O14646 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC33.02■■■□□ 2.88
CHD1O14646 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
CHD1O14646 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC33.02■■■□□ 2.88
CHD1O14646 COMT-203ENST00000403184 2217 ntTSL 2 BASIC33.02■■■□□ 2.88
CHD1O14646 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CHD1O14646 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CHD1O14646 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC33.01■■■□□ 2.88
CHD1O14646 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC33.01■■■□□ 2.87
CHD1O14646 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC33.01■■■□□ 2.87
CHD1O14646 AC092647.4-201ENST00000457211 535 ntBASIC33.01■■■□□ 2.87
CHD1O14646 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC33.01■■■□□ 2.87
CHD1O14646 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC33.01■■■□□ 2.87
CHD1O14646 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC33.01■■■□□ 2.87
CHD1O14646 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.87
CHD1O14646 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC33■■■□□ 2.87
CHD1O14646 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC33■■■□□ 2.87
CHD1O14646 TSPY21P-201ENST00000433481 731 ntBASIC33■■■□□ 2.87
CHD1O14646 TSPY23P-201ENST00000440136 739 ntBASIC33■■■□□ 2.87
CHD1O14646 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC33■■■□□ 2.87
CHD1O14646 FDX2-206ENST00000492239 773 ntTSL 2 BASIC33■■■□□ 2.87
CHD1O14646 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC33■■■□□ 2.87
CHD1O14646 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC33■■■□□ 2.87
CHD1O14646 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC33■■■□□ 2.87
CHD1O14646 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC33■■■□□ 2.87
CHD1O14646 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC33■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms