Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.99■□□□□ 0.63
CLDN4O14493 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CLDN4O14493 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.99■□□□□ 0.63
CLDN4O14493 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN4O14493 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN4O14493 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN4O14493 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CLDN4O14493 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN4O14493 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN4O14493 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN4O14493 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.99■□□□□ 0.63
CLDN4O14493 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.99■□□□□ 0.63
CLDN4O14493 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.99■□□□□ 0.63
CLDN4O14493 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN4O14493 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
CLDN4O14493 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN4O14493 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CLDN4O14493 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLDN4O14493 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.99■□□□□ 0.63
CLDN4O14493 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.99■□□□□ 0.63
CLDN4O14493 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
CLDN4O14493 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.99■□□□□ 0.63
CLDN4O14493 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN4O14493 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN4O14493 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN4O14493 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLDN4O14493 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLDN4O14493 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.98■□□□□ 0.63
CLDN4O14493 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.98■□□□□ 0.63
CLDN4O14493 AC083880.1-201ENST00000608266 535 ntBASIC18.98■□□□□ 0.63
CLDN4O14493 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN4O14493 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.98■□□□□ 0.63
CLDN4O14493 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN4O14493 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN4O14493 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN4O14493 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CLDN4O14493 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.97■□□□□ 0.63
CLDN4O14493 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN4O14493 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN4O14493 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN4O14493 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
CLDN4O14493 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN4O14493 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CLDN4O14493 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN4O14493 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.97■□□□□ 0.63
CLDN4O14493 HLA-B-256ENST00000639848 1089 ntBASIC18.97■□□□□ 0.63
CLDN4O14493 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN4O14493 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.97■□□□□ 0.63
CLDN4O14493 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CLDN4O14493 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CLDN4O14493 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN4O14493 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN4O14493 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN4O14493 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
CLDN4O14493 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDN4O14493 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN4O14493 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN4O14493 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CLDN4O14493 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.96■□□□□ 0.63
CLDN4O14493 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN4O14493 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN4O14493 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN4O14493 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDN4O14493 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.96■□□□□ 0.63
CLDN4O14493 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.96■□□□□ 0.63
CLDN4O14493 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN4O14493 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDN4O14493 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.96■□□□□ 0.63
CLDN4O14493 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN4O14493 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDN4O14493 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN4O14493 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN4O14493 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN4O14493 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN4O14493 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN4O14493 AL390719.1-204ENST00000412397 1219 ntBASIC18.95■□□□□ 0.62
CLDN4O14493 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN4O14493 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN4O14493 KRT18P6-201ENST00000555540 1265 ntBASIC18.95■□□□□ 0.62
CLDN4O14493 AC060766.5-201ENST00000590539 871 ntBASIC18.95■□□□□ 0.62
CLDN4O14493 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN4O14493 AC020907.5-201ENST00000624372 1936 ntBASIC18.95■□□□□ 0.62
CLDN4O14493 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN4O14493 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLDN4O14493 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN4O14493 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN4O14493 DPP3P2-201ENST00000416030 1696 ntBASIC18.95■□□□□ 0.62
CLDN4O14493 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN4O14493 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN4O14493 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN4O14493 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CLDN4O14493 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN4O14493 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN4O14493 FEM1AP1-201ENST00000431297 1995 ntBASIC18.94■□□□□ 0.62
CLDN4O14493 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CLDN4O14493 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.94■□□□□ 0.62
CLDN4O14493 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN4O14493 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN4O14493 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
CLDN4O14493 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms