Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 AC016405.3-201ENST00000607710 860 ntBASIC19.68■□□□□ 0.74
E2F3O00716 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.68■□□□□ 0.74
E2F3O00716 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
E2F3O00716 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
E2F3O00716 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.68■□□□□ 0.74
E2F3O00716 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
E2F3O00716 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
E2F3O00716 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
E2F3O00716 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.68■□□□□ 0.74
E2F3O00716 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
E2F3O00716 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.67■□□□□ 0.74
E2F3O00716 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
E2F3O00716 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
E2F3O00716 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
E2F3O00716 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
E2F3O00716 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
E2F3O00716 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
E2F3O00716 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.67■□□□□ 0.74
E2F3O00716 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.67■□□□□ 0.74
E2F3O00716 AL356652.1-201ENST00000615962 565 ntBASIC19.67■□□□□ 0.74
E2F3O00716 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
E2F3O00716 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
E2F3O00716 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
E2F3O00716 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
E2F3O00716 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.66■□□□□ 0.74
E2F3O00716 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.66■□□□□ 0.74
E2F3O00716 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
E2F3O00716 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
E2F3O00716 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.66■□□□□ 0.74
E2F3O00716 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
E2F3O00716 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
E2F3O00716 PGM5P4-201ENST00000421970 445 ntBASIC19.66■□□□□ 0.74
E2F3O00716 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.66■□□□□ 0.74
E2F3O00716 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
E2F3O00716 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
E2F3O00716 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
E2F3O00716 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.66■□□□□ 0.74
E2F3O00716 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
E2F3O00716 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
E2F3O00716 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
E2F3O00716 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.65■□□□□ 0.74
E2F3O00716 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
E2F3O00716 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
E2F3O00716 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
E2F3O00716 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.65■□□□□ 0.74
E2F3O00716 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
E2F3O00716 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
E2F3O00716 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
E2F3O00716 GPX1P1-201ENST00000388829 606 ntBASIC19.65■□□□□ 0.74
E2F3O00716 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.65■□□□□ 0.74
E2F3O00716 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.65■□□□□ 0.74
E2F3O00716 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.65■□□□□ 0.74
E2F3O00716 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
E2F3O00716 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.65■□□□□ 0.74
E2F3O00716 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
E2F3O00716 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
E2F3O00716 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
E2F3O00716 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
E2F3O00716 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
E2F3O00716 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
E2F3O00716 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
E2F3O00716 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
E2F3O00716 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
E2F3O00716 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
E2F3O00716 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
E2F3O00716 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
E2F3O00716 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.64■□□□□ 0.73
E2F3O00716 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.64■□□□□ 0.73
E2F3O00716 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
E2F3O00716 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.64■□□□□ 0.73
E2F3O00716 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
E2F3O00716 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
E2F3O00716 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
E2F3O00716 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
E2F3O00716 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
E2F3O00716 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
E2F3O00716 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.63■□□□□ 0.73
E2F3O00716 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
E2F3O00716 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
E2F3O00716 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
E2F3O00716 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.63■□□□□ 0.73
E2F3O00716 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.63■□□□□ 0.73
E2F3O00716 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
E2F3O00716 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
E2F3O00716 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.63■□□□□ 0.73
E2F3O00716 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
E2F3O00716 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.63■□□□□ 0.73
E2F3O00716 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
E2F3O00716 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
E2F3O00716 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
E2F3O00716 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
E2F3O00716 CNN2P6-201ENST00000439038 900 ntBASIC19.63■□□□□ 0.73
E2F3O00716 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
E2F3O00716 AL050303.2-201ENST00000619798 666 ntBASIC19.63■□□□□ 0.73
E2F3O00716 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
E2F3O00716 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
E2F3O00716 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
E2F3O00716 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
E2F3O00716 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
E2F3O00716 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms