Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK2O00526 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.18■□□□□ 0.18
UPK2O00526 AC087633.2-202ENST00000565166 1439 ntBASIC16.18■□□□□ 0.18
UPK2O00526 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK2O00526 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.18■□□□□ 0.18
UPK2O00526 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK2O00526 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK2O00526 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.17■□□□□ 0.18
UPK2O00526 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK2O00526 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.17■□□□□ 0.18
UPK2O00526 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK2O00526 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK2O00526 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
UPK2O00526 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.17■□□□□ 0.18
UPK2O00526 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UPK2O00526 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
UPK2O00526 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.17■□□□□ 0.18
UPK2O00526 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.17■□□□□ 0.18
UPK2O00526 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.17■□□□□ 0.18
UPK2O00526 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.17■□□□□ 0.18
UPK2O00526 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.17■□□□□ 0.18
UPK2O00526 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.17■□□□□ 0.18
UPK2O00526 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK2O00526 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.17■□□□□ 0.18
UPK2O00526 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
UPK2O00526 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK2O00526 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK2O00526 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
UPK2O00526 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK2O00526 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
UPK2O00526 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK2O00526 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.17■□□□□ 0.18
UPK2O00526 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UPK2O00526 BX119927.1-201ENST00000636596 1552 ntBASIC16.17■□□□□ 0.18
UPK2O00526 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK2O00526 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK2O00526 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.17■□□□□ 0.18
UPK2O00526 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK2O00526 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.16■□□□□ 0.18
UPK2O00526 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UPK2O00526 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK2O00526 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK2O00526 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK2O00526 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.16■□□□□ 0.18
UPK2O00526 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UPK2O00526 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK2O00526 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UPK2O00526 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.16■□□□□ 0.18
UPK2O00526 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK2O00526 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.16■□□□□ 0.18
UPK2O00526 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UPK2O00526 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.16■□□□□ 0.18
UPK2O00526 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
UPK2O00526 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK2O00526 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
UPK2O00526 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.16■□□□□ 0.18
UPK2O00526 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK2O00526 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.16■□□□□ 0.18
UPK2O00526 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK2O00526 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.16■□□□□ 0.18
UPK2O00526 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.16■□□□□ 0.18
UPK2O00526 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK2O00526 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK2O00526 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
UPK2O00526 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UPK2O00526 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK2O00526 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
UPK2O00526 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.16■□□□□ 0.18
UPK2O00526 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
UPK2O00526 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.15■□□□□ 0.18
UPK2O00526 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.15■□□□□ 0.18
UPK2O00526 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK2O00526 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK2O00526 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.15■□□□□ 0.18
UPK2O00526 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UPK2O00526 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.15■□□□□ 0.18
UPK2O00526 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
UPK2O00526 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK2O00526 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK2O00526 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
UPK2O00526 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UPK2O00526 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UPK2O00526 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK2O00526 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK2O00526 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.15■□□□□ 0.18
UPK2O00526 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.15■□□□□ 0.18
UPK2O00526 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.15■□□□□ 0.18
UPK2O00526 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
UPK2O00526 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UPK2O00526 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
UPK2O00526 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK2O00526 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.15■□□□□ 0.18
UPK2O00526 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK2O00526 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK2O00526 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
UPK2O00526 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
UPK2O00526 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.15■□□□□ 0.18
UPK2O00526 CYP21A1P-202ENST00000354927 1481 ntBASIC16.15■□□□□ 0.18
UPK2O00526 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.15■□□□□ 0.18
UPK2O00526 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms