Protein–RNA interactions for Protein: O00339

MATN2, Matrilin-2, humanhuman

Predictions only

Length 956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATN2O00339 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.08■□□□□ 0.81
MATN2O00339 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.08■□□□□ 0.81
MATN2O00339 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
MATN2O00339 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MATN2O00339 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.08■□□□□ 0.8
MATN2O00339 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MATN2O00339 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
MATN2O00339 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
MATN2O00339 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MATN2O00339 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MATN2O00339 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MATN2O00339 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.07■□□□□ 0.8
MATN2O00339 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MATN2O00339 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MATN2O00339 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.07■□□□□ 0.8
MATN2O00339 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MATN2O00339 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
MATN2O00339 TSPY6P-201ENST00000448518 926 ntBASIC20.07■□□□□ 0.8
MATN2O00339 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MATN2O00339 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.07■□□□□ 0.8
MATN2O00339 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.07■□□□□ 0.8
MATN2O00339 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.07■□□□□ 0.8
MATN2O00339 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
MATN2O00339 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.06■□□□□ 0.8
MATN2O00339 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
MATN2O00339 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MATN2O00339 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MATN2O00339 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MATN2O00339 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MATN2O00339 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MATN2O00339 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MATN2O00339 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MATN2O00339 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MATN2O00339 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.06■□□□□ 0.8
MATN2O00339 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MATN2O00339 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.06■□□□□ 0.8
MATN2O00339 AC105036.2-201ENST00000569468 176 ntBASIC20.06■□□□□ 0.8
MATN2O00339 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MATN2O00339 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.06■□□□□ 0.8
MATN2O00339 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MATN2O00339 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MATN2O00339 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.06■□□□□ 0.8
MATN2O00339 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MATN2O00339 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MATN2O00339 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.05■□□□□ 0.8
MATN2O00339 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MATN2O00339 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.05■□□□□ 0.8
MATN2O00339 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MATN2O00339 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MATN2O00339 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
MATN2O00339 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
MATN2O00339 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MATN2O00339 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.05■□□□□ 0.8
MATN2O00339 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.05■□□□□ 0.8
MATN2O00339 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MATN2O00339 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
MATN2O00339 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MATN2O00339 AC091799.1-201ENST00000422823 811 ntBASIC20.05■□□□□ 0.8
MATN2O00339 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.05■□□□□ 0.8
MATN2O00339 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.05■□□□□ 0.8
MATN2O00339 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
MATN2O00339 FAM21FP-204ENST00000608637 956 ntBASIC20.05■□□□□ 0.8
MATN2O00339 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MATN2O00339 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
MATN2O00339 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.05■□□□□ 0.8
MATN2O00339 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MATN2O00339 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
MATN2O00339 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MATN2O00339 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MATN2O00339 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MATN2O00339 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MATN2O00339 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.04■□□□□ 0.8
MATN2O00339 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
MATN2O00339 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MATN2O00339 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MATN2O00339 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MATN2O00339 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MATN2O00339 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
MATN2O00339 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.04■□□□□ 0.8
MATN2O00339 RARRES2P4-201ENST00000514074 484 ntBASIC20.04■□□□□ 0.8
MATN2O00339 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
MATN2O00339 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.04■□□□□ 0.8
MATN2O00339 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MATN2O00339 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MATN2O00339 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
MATN2O00339 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MATN2O00339 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MATN2O00339 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MATN2O00339 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
MATN2O00339 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
MATN2O00339 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.04■□□□□ 0.8
MATN2O00339 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MATN2O00339 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MATN2O00339 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MATN2O00339 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
MATN2O00339 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MATN2O00339 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MATN2O00339 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MATN2O00339 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MATN2O00339 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms