Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3FO00303 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3FO00303 AC099778.1-201ENST00000568593 1911 ntBASIC19.75■□□□□ 0.75
EIF3FO00303 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3FO00303 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.75■□□□□ 0.75
EIF3FO00303 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.75■□□□□ 0.75
EIF3FO00303 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.75■□□□□ 0.75
EIF3FO00303 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.75■□□□□ 0.75
EIF3FO00303 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.75■□□□□ 0.75
EIF3FO00303 AC105036.2-201ENST00000569468 176 ntBASIC19.75■□□□□ 0.75
EIF3FO00303 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.75■□□□□ 0.75
EIF3FO00303 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.75■□□□□ 0.75
EIF3FO00303 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.75■□□□□ 0.75
EIF3FO00303 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3FO00303 SMG8-203ENST00000578922 2178 ntBASIC19.75■□□□□ 0.75
EIF3FO00303 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3FO00303 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
EIF3FO00303 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3FO00303 MKRN4P-201ENST00000444706 1521 ntBASIC19.75■□□□□ 0.75
EIF3FO00303 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3FO00303 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3FO00303 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.75■□□□□ 0.75
EIF3FO00303 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EIF3FO00303 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3FO00303 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3FO00303 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3FO00303 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3FO00303 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3FO00303 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3FO00303 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
EIF3FO00303 PTBP1P-201ENST00000554374 1601 ntBASIC19.74■□□□□ 0.75
EIF3FO00303 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.74■□□□□ 0.75
EIF3FO00303 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.74■□□□□ 0.75
EIF3FO00303 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3FO00303 AL121832.2-201ENST00000610979 668 ntBASIC19.74■□□□□ 0.75
EIF3FO00303 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.74■□□□□ 0.75
EIF3FO00303 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3FO00303 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3FO00303 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3FO00303 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3FO00303 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3FO00303 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3FO00303 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.74■□□□□ 0.75
EIF3FO00303 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EIF3FO00303 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.73■□□□□ 0.75
EIF3FO00303 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EIF3FO00303 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
EIF3FO00303 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.73■□□□□ 0.75
EIF3FO00303 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EIF3FO00303 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
EIF3FO00303 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EIF3FO00303 KRT17P1-201ENST00000399211 1546 ntBASIC19.73■□□□□ 0.75
EIF3FO00303 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
EIF3FO00303 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.73■□□□□ 0.75
EIF3FO00303 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.73■□□□□ 0.75
EIF3FO00303 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.73■□□□□ 0.75
EIF3FO00303 C2orf69P4-201ENST00000565394 541 ntBASIC19.73■□□□□ 0.75
EIF3FO00303 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
EIF3FO00303 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.73■□□□□ 0.75
EIF3FO00303 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EIF3FO00303 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.73■□□□□ 0.75
EIF3FO00303 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
EIF3FO00303 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.73■□□□□ 0.75
EIF3FO00303 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
EIF3FO00303 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EIF3FO00303 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EIF3FO00303 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.72■□□□□ 0.75
EIF3FO00303 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.72■□□□□ 0.75
EIF3FO00303 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
EIF3FO00303 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.72■□□□□ 0.75
EIF3FO00303 AC073130.3-201ENST00000624389 2278 ntBASIC19.72■□□□□ 0.75
EIF3FO00303 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.72■□□□□ 0.75
EIF3FO00303 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
EIF3FO00303 LSM12P1-201ENST00000411836 588 ntBASIC19.72■□□□□ 0.75
EIF3FO00303 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.72■□□□□ 0.75
EIF3FO00303 AC006970.2-201ENST00000450065 779 ntBASIC19.72■□□□□ 0.75
EIF3FO00303 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.72■□□□□ 0.75
EIF3FO00303 BX119927.1-201ENST00000636596 1552 ntBASIC19.72■□□□□ 0.75
EIF3FO00303 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
EIF3FO00303 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EIF3FO00303 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EIF3FO00303 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EIF3FO00303 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EIF3FO00303 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
EIF3FO00303 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
EIF3FO00303 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.71■□□□□ 0.75
EIF3FO00303 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
EIF3FO00303 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EIF3FO00303 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.71■□□□□ 0.75
EIF3FO00303 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
EIF3FO00303 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.71■□□□□ 0.75
EIF3FO00303 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.71■□□□□ 0.75
EIF3FO00303 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EIF3FO00303 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EIF3FO00303 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
EIF3FO00303 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EIF3FO00303 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EIF3FO00303 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EIF3FO00303 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EIF3FO00303 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms