Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP3B1O00203 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.38■□□□□ 0.85
AP3B1O00203 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.38■□□□□ 0.85
AP3B1O00203 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP3B1O00203 AC011767.1-201ENST00000617410 1153 ntBASIC20.38■□□□□ 0.85
AP3B1O00203 BID-214ENST00000617586 542 ntTSL 5 BASIC20.38■□□□□ 0.85
AP3B1O00203 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
AP3B1O00203 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP3B1O00203 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP3B1O00203 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP3B1O00203 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.38■□□□□ 0.85
AP3B1O00203 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
AP3B1O00203 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP3B1O00203 AC068338.2-201ENST00000563278 1430 ntBASIC20.37■□□□□ 0.85
AP3B1O00203 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
AP3B1O00203 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP3B1O00203 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP3B1O00203 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP3B1O00203 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
AP3B1O00203 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP3B1O00203 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.37■□□□□ 0.85
AP3B1O00203 CNN2P6-201ENST00000439038 900 ntBASIC20.37■□□□□ 0.85
AP3B1O00203 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.37■□□□□ 0.85
AP3B1O00203 AC008694.1-202ENST00000636953 945 ntBASIC20.37■□□□□ 0.85
AP3B1O00203 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP3B1O00203 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
AP3B1O00203 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP3B1O00203 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.37■□□□□ 0.85
AP3B1O00203 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP3B1O00203 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.37■□□□□ 0.85
AP3B1O00203 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP3B1O00203 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
AP3B1O00203 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP3B1O00203 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.36■□□□□ 0.85
AP3B1O00203 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.36■□□□□ 0.85
AP3B1O00203 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.36■□□□□ 0.85
AP3B1O00203 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.36■□□□□ 0.85
AP3B1O00203 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
AP3B1O00203 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP3B1O00203 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
AP3B1O00203 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
AP3B1O00203 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP3B1O00203 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AP3B1O00203 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.35■□□□□ 0.85
AP3B1O00203 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
AP3B1O00203 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP3B1O00203 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP3B1O00203 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.35■□□□□ 0.85
AP3B1O00203 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
AP3B1O00203 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.35■□□□□ 0.85
AP3B1O00203 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.35■□□□□ 0.85
AP3B1O00203 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP3B1O00203 BX119927.1-201ENST00000636596 1552 ntBASIC20.35■□□□□ 0.85
AP3B1O00203 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.35■□□□□ 0.85
AP3B1O00203 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP3B1O00203 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
AP3B1O00203 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP3B1O00203 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP3B1O00203 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
AP3B1O00203 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
AP3B1O00203 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.35■□□□□ 0.85
AP3B1O00203 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.35■□□□□ 0.85
AP3B1O00203 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP3B1O00203 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP3B1O00203 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP3B1O00203 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
AP3B1O00203 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
AP3B1O00203 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP3B1O00203 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP3B1O00203 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.34■□□□□ 0.85
AP3B1O00203 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
AP3B1O00203 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
AP3B1O00203 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP3B1O00203 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP3B1O00203 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP3B1O00203 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
AP3B1O00203 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.34■□□□□ 0.85
AP3B1O00203 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
AP3B1O00203 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.34■□□□□ 0.85
AP3B1O00203 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.34■□□□□ 0.85
AP3B1O00203 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP3B1O00203 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.34■□□□□ 0.85
AP3B1O00203 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
AP3B1O00203 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
AP3B1O00203 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.34■□□□□ 0.85
AP3B1O00203 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP3B1O00203 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
AP3B1O00203 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP3B1O00203 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP3B1O00203 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
AP3B1O00203 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.33■□□□□ 0.85
AP3B1O00203 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
AP3B1O00203 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
AP3B1O00203 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
AP3B1O00203 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
AP3B1O00203 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.33■□□□□ 0.85
AP3B1O00203 KRT18P68-201ENST00000392293 1000 ntBASIC20.33■□□□□ 0.85
AP3B1O00203 AC007322.1-201ENST00000426983 750 ntBASIC20.33■□□□□ 0.85
AP3B1O00203 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.33■□□□□ 0.85
AP3B1O00203 OR10C1-204ENST00000622521 1039 ntBASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms