Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
NPIPA3F8WFD2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA3F8WFD2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA3F8WFD2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.36■□□□□ 0.53
NPIPA3F8WFD2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.36■□□□□ 0.53
NPIPA3F8WFD2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA3F8WFD2 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.36■□□□□ 0.53
NPIPA3F8WFD2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA3F8WFD2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.36■□□□□ 0.53
NPIPA3F8WFD2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.36■□□□□ 0.53
NPIPA3F8WFD2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA3F8WFD2 PLK5-205ENST00000642079 1969 ntBASIC18.36■□□□□ 0.53
NPIPA3F8WFD2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPA3F8WFD2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 AL356652.1-201ENST00000615962 565 ntBASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA3F8WFD2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.33■□□□□ 0.53
NPIPA3F8WFD2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
NPIPA3F8WFD2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.33■□□□□ 0.53
NPIPA3F8WFD2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NPIPA3F8WFD2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.33■□□□□ 0.52
NPIPA3F8WFD2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.33■□□□□ 0.52
NPIPA3F8WFD2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.33■□□□□ 0.52
NPIPA3F8WFD2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
NPIPA3F8WFD2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.33■□□□□ 0.52
NPIPA3F8WFD2 C1QBPP2-201ENST00000528754 825 ntBASIC18.33■□□□□ 0.52
NPIPA3F8WFD2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.33■□□□□ 0.52
NPIPA3F8WFD2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
NPIPA3F8WFD2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
NPIPA3F8WFD2 FAM197Y4-202ENST00000622692 608 ntBASIC18.33■□□□□ 0.52
NPIPA3F8WFD2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPA3F8WFD2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPA3F8WFD2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPA3F8WFD2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.33■□□□□ 0.52
NPIPA3F8WFD2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
NPIPA3F8WFD2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
NPIPA3F8WFD2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 AL359736.2-201ENST00000621992 437 ntBASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA3F8WFD2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms