Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
NPIPA2E9PIF3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA2E9PIF3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
NPIPA2E9PIF3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.36■□□□□ 0.53
NPIPA2E9PIF3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA2E9PIF3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
NPIPA2E9PIF3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA2E9PIF3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA2E9PIF3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.36■□□□□ 0.53
NPIPA2E9PIF3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.36■□□□□ 0.53
NPIPA2E9PIF3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA2E9PIF3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.36■□□□□ 0.53
NPIPA2E9PIF3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA2E9PIF3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.36■□□□□ 0.53
NPIPA2E9PIF3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.36■□□□□ 0.53
NPIPA2E9PIF3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NPIPA2E9PIF3 PLK5-205ENST00000642079 1969 ntBASIC18.36■□□□□ 0.53
NPIPA2E9PIF3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.35■□□□□ 0.53
NPIPA2E9PIF3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 AL356652.1-201ENST00000615962 565 ntBASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPIPA2E9PIF3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.33■□□□□ 0.53
NPIPA2E9PIF3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
NPIPA2E9PIF3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.33■□□□□ 0.53
NPIPA2E9PIF3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NPIPA2E9PIF3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.33■□□□□ 0.52
NPIPA2E9PIF3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.33■□□□□ 0.52
NPIPA2E9PIF3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.33■□□□□ 0.52
NPIPA2E9PIF3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
NPIPA2E9PIF3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.33■□□□□ 0.52
NPIPA2E9PIF3 C1QBPP2-201ENST00000528754 825 ntBASIC18.33■□□□□ 0.52
NPIPA2E9PIF3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.33■□□□□ 0.52
NPIPA2E9PIF3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
NPIPA2E9PIF3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
NPIPA2E9PIF3 FAM197Y4-202ENST00000622692 608 ntBASIC18.33■□□□□ 0.52
NPIPA2E9PIF3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPA2E9PIF3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPA2E9PIF3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPIPA2E9PIF3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.33■□□□□ 0.52
NPIPA2E9PIF3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
NPIPA2E9PIF3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
NPIPA2E9PIF3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.32■□□□□ 0.52
NPIPA2E9PIF3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms