Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TCRBV5S1A1TA0A578 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.11■□□□□ 0.97
TCRBV5S1A1TA0A578 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TCRBV5S1A1TA0A578 MKRN4P-201ENST00000444706 1521 ntBASIC21.11■□□□□ 0.97
TCRBV5S1A1TA0A578 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TCRBV5S1A1TA0A578 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TCRBV5S1A1TA0A578 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TCRBV5S1A1TA0A578 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.11■□□□□ 0.97
TCRBV5S1A1TA0A578 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.11■□□□□ 0.97
TCRBV5S1A1TA0A578 C2orf69P4-201ENST00000565394 541 ntBASIC21.11■□□□□ 0.97
TCRBV5S1A1TA0A578 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.11■□□□□ 0.97
TCRBV5S1A1TA0A578 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TCRBV5S1A1TA0A578 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TCRBV5S1A1TA0A578 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TCRBV5S1A1TA0A578 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.11■□□□□ 0.97
TCRBV5S1A1TA0A578 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TCRBV5S1A1TA0A578 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TCRBV5S1A1TA0A578 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TCRBV5S1A1TA0A578 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TCRBV5S1A1TA0A578 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TCRBV5S1A1TA0A578 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TCRBV5S1A1TA0A578 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.1■□□□□ 0.97
TCRBV5S1A1TA0A578 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.1■□□□□ 0.97
TCRBV5S1A1TA0A578 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.1■□□□□ 0.97
TCRBV5S1A1TA0A578 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.1■□□□□ 0.97
TCRBV5S1A1TA0A578 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TCRBV5S1A1TA0A578 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.1■□□□□ 0.97
TCRBV5S1A1TA0A578 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.1■□□□□ 0.97
TCRBV5S1A1TA0A578 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TCRBV5S1A1TA0A578 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TCRBV5S1A1TA0A578 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TCRBV5S1A1TA0A578 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.1■□□□□ 0.97
TCRBV5S1A1TA0A578 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
TCRBV5S1A1TA0A578 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TCRBV5S1A1TA0A578 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TCRBV5S1A1TA0A578 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.09■□□□□ 0.97
TCRBV5S1A1TA0A578 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.09■□□□□ 0.97
TCRBV5S1A1TA0A578 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TCRBV5S1A1TA0A578 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.09■□□□□ 0.97
TCRBV5S1A1TA0A578 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.09■□□□□ 0.97
TCRBV5S1A1TA0A578 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.09■□□□□ 0.97
TCRBV5S1A1TA0A578 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.09■□□□□ 0.97
TCRBV5S1A1TA0A578 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TCRBV5S1A1TA0A578 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TCRBV5S1A1TA0A578 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TCRBV5S1A1TA0A578 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TCRBV5S1A1TA0A578 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TCRBV5S1A1TA0A578 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TCRBV5S1A1TA0A578 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TCRBV5S1A1TA0A578 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TCRBV5S1A1TA0A578 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TCRBV5S1A1TA0A578 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TCRBV5S1A1TA0A578 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TCRBV5S1A1TA0A578 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.08■□□□□ 0.97
TCRBV5S1A1TA0A578 NCF1B-203ENST00000435988 1254 ntBASIC21.08■□□□□ 0.97
TCRBV5S1A1TA0A578 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.08■□□□□ 0.97
TCRBV5S1A1TA0A578 KRT8P17-201ENST00000453110 1448 ntBASIC21.08■□□□□ 0.97
TCRBV5S1A1TA0A578 AC083906.2-201ENST00000511578 360 ntBASIC21.08■□□□□ 0.97
TCRBV5S1A1TA0A578 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.08■□□□□ 0.97
TCRBV5S1A1TA0A578 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TCRBV5S1A1TA0A578 AC125437.2-201ENST00000625180 2167 ntBASIC21.08■□□□□ 0.97
TCRBV5S1A1TA0A578 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TCRBV5S1A1TA0A578 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TCRBV5S1A1TA0A578 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TCRBV5S1A1TA0A578 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TCRBV5S1A1TA0A578 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.08■□□□□ 0.96
TCRBV5S1A1TA0A578 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
TCRBV5S1A1TA0A578 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TCRBV5S1A1TA0A578 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TCRBV5S1A1TA0A578 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TCRBV5S1A1TA0A578 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TCRBV5S1A1TA0A578 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TCRBV5S1A1TA0A578 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.07■□□□□ 0.96
TCRBV5S1A1TA0A578 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.07■□□□□ 0.96
TCRBV5S1A1TA0A578 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.07■□□□□ 0.96
TCRBV5S1A1TA0A578 AL031963.3-201ENST00000606441 850 ntBASIC21.07■□□□□ 0.96
TCRBV5S1A1TA0A578 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
TCRBV5S1A1TA0A578 AL121832.2-201ENST00000610979 668 ntBASIC21.07■□□□□ 0.96
TCRBV5S1A1TA0A578 AC092666.2-201ENST00000613287 246 ntBASIC21.07■□□□□ 0.96
TCRBV5S1A1TA0A578 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TCRBV5S1A1TA0A578 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TCRBV5S1A1TA0A578 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.07■□□□□ 0.96
TCRBV5S1A1TA0A578 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TCRBV5S1A1TA0A578 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TCRBV5S1A1TA0A578 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TCRBV5S1A1TA0A578 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TCRBV5S1A1TA0A578 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.06■□□□□ 0.96
TCRBV5S1A1TA0A578 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TCRBV5S1A1TA0A578 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.06■□□□□ 0.96
TCRBV5S1A1TA0A578 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TCRBV5S1A1TA0A578 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms