Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
DUXBA0A1W2PPF3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.44■□□□□ 0.22
DUXBA0A1W2PPF3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DUXBA0A1W2PPF3 MIR572-201ENST00000384983 95 ntBASIC16.44■□□□□ 0.22
DUXBA0A1W2PPF3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
DUXBA0A1W2PPF3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DUXBA0A1W2PPF3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.44■□□□□ 0.22
DUXBA0A1W2PPF3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
DUXBA0A1W2PPF3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DUXBA0A1W2PPF3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
DUXBA0A1W2PPF3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.44■□□□□ 0.22
DUXBA0A1W2PPF3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
DUXBA0A1W2PPF3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.44■□□□□ 0.22
DUXBA0A1W2PPF3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
DUXBA0A1W2PPF3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.44■□□□□ 0.22
DUXBA0A1W2PPF3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.43■□□□□ 0.22
DUXBA0A1W2PPF3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 AL356441.2-201ENST00000443009 864 ntBASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 AC138907.5-202ENST00000569484 235 ntBASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.42■□□□□ 0.22
DUXBA0A1W2PPF3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 UNC93B3-201ENST00000308076 687 ntBASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 AC027682.1-201ENST00000562846 899 ntBASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 KRT87P-202ENST00000534226 1464 ntBASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
DUXBA0A1W2PPF3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DUXBA0A1W2PPF3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
DUXBA0A1W2PPF3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DUXBA0A1W2PPF3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DUXBA0A1W2PPF3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms