Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 TERF1P2-201ENST00000583350 1212 ntBASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF103-CHMP3A0A140T963 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 AC099778.1-201ENST00000568593 1911 ntBASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 AP001160.3-201ENST00000601484 763 ntBASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RNF103-CHMP3A0A140T963 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 CCDC92B-201ENST00000575506 885 ntBASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF103-CHMP3A0A140T963 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF103-CHMP3A0A140T963 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF103-CHMP3A0A140T963 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF103-CHMP3A0A140T963 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF103-CHMP3A0A140T963 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RNF103-CHMP3A0A140T963 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF103-CHMP3A0A140T963 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF103-CHMP3A0A140T963 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF103-CHMP3A0A140T963 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF103-CHMP3A0A140T963 SLC7A5P2-201ENST00000553010 536 ntBASIC19.34■□□□□ 0.69
RNF103-CHMP3A0A140T963 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF103-CHMP3A0A140T963 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF103-CHMP3A0A140T963 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF103-CHMP3A0A140T963 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF103-CHMP3A0A140T963 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF103-CHMP3A0A140T963 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF103-CHMP3A0A140T963 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RNF103-CHMP3A0A140T963 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF103-CHMP3A0A140T963 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF103-CHMP3A0A140T963 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF103-CHMP3A0A140T963 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.33■□□□□ 0.69
RNF103-CHMP3A0A140T963 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF103-CHMP3A0A140T963 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RNF103-CHMP3A0A140T963 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF103-CHMP3A0A140T963 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF103-CHMP3A0A140T963 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF103-CHMP3A0A140T963 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms