Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 AC004408.2-201ENST00000623613 2777 ntBASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 TPRG1LP1-201ENST00000598702 760 ntBASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 Z82202.1-201ENST00000623446 1880 ntBASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRBV27A0A0K0K1C4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRBV27A0A0K0K1C4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 AC079140.4-201ENST00000507448 529 ntBASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRBV27A0A0K0K1C4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms