Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	YML039W	YML039W	5268 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YML045W	YML045W	5268 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YMR050C	YMR050C	5268 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YOL103W-B	YOL103W-B	5268 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YBR012W-B	YBR012W-B	5271 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YOR142W-B	YOR142W-B	5268 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YPL257W-B	YPL257W-B	5268 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YPR158W-B	YPR158W-B	5271 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	KRE33	YNL132W	3171 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	ILS1	YBL076C	3219 nt		2.93	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YIL080W	YIL080W	4722 nt		2.93	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	RPL23B	YER117W	414 nt		2.93	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YNL067W-B	YNL067W-B	141 nt		2.93	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	SGM1	YJR134C	2124 nt		2.93	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	SPC98	YNL126W	2541 nt		2.92	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	PEP3	YLR148W	2757 nt		2.92	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	MDM1	YML104C	3384 nt		2.92	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YBR221W-A	YBR221W-A	105 nt		2.92	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	POL3	YDL102W	3294 nt		2.92	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	TOM1	YDR457W	9807 nt		2.92	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	NCA2	YPR155C	1851 nt		2.92	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YPR089W	YPR089W	2667 nt		2.92	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	SPO75	YLL005C	2607 nt		2.91	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YDL196W	YDL196W	330 nt		2.91	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	NOP10	YHR072W-A	177 nt		2.91	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	RPH1	YER169W	2391 nt		2.91	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	ROG1	YGL144C	2058 nt		2.91	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	MSC6	YOR354C	2079 nt		2.91	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	DNL4	YOR005C	2835 nt		2.9	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	AMS1	YGL156W	3252 nt		2.9	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	FMP16	YDR070C	282 nt		2.9	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	RPL42B	YHR141C	321 nt		2.9	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	YBL012C	YBL012C	402 nt		2.9	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	RPL42A	YNL162W	321 nt		2.9	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	TRS130	YMR218C	3309 nt		2.9	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	NIP100	YPL174C	2607 nt		2.89	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	YCR095W-A	YCR095W-A	159 nt		2.89	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	SLY1	YDR189W	2001 nt		2.89	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	RFX1	YLR176C	2436 nt		2.89	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	SDC25	YLL016W	3147 nt		2.88	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	HRD3	YLR207W	2502 nt		2.88	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	NMD2	YHR077C	3270 nt		2.88	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	CRS5	YOR031W	210 nt		2.88	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	RTT10	YPL183C	3042 nt		2.87	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	FIG4	YNL325C	2640 nt		2.87	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	YLL019W-A	YLL019W-A	93 nt		2.87	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	YNL114C	YNL114C	372 nt		2.87	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	YBL005W-B	YBL005W-B	5268 nt		2.87	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	GIS1	YDR096W	2685 nt		2.86	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	SRP14	YDL092W	441 nt		2.86	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	YHR071C-A	YHR071C-A	321 nt		2.86	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	YHR073W-A	YHR073W-A	177 nt		2.86	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	RIC1	YLR039C	3171 nt		2.86	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	RLM1	YPL089C	2031 nt		2.86	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	RGC1	YPR115W	3252 nt		2.86	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	HAL9	YOL089C	3093 nt		2.86	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	tF(GAA)D	tF(GAA)D	73 nt		2.85	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	tF(GAA)N	tF(GAA)N	73 nt		2.85	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	YJL120W	YJL120W	324 nt		2.85	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	RPS25B	YLR333C	327 nt		2.85	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	PRP6	YBR055C	2700 nt		2.85	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	PMR1	YGL167C	2853 nt		2.85	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	TAE2	YPL009C	3117 nt		2.84	□□□□□ -1.95
TY4B-P	A0A0B7P3V8	BPT1	YLL015W	4680 nt		2.84	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	YCR043C	YCR043C	384 nt		2.83	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	YLR282C	YLR282C	342 nt		2.83	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	PSD2	YGR170W	3417 nt		2.83	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	SCH9	YHR205W	2475 nt		2.83	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	MNE1	YOR350C	1992 nt		2.83	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	NUM1	YDR150W	8247 nt		2.83	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	SEC7	YDR170C	6030 nt		2.83	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	KAP123	YER110C	3342 nt		2.83	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	SWI5	YDR146C	2130 nt		2.83	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	PTP3	YER075C	2787 nt		2.83	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	MRD1	YPR112C	2664 nt		2.82	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	PAU3	YCR104W	375 nt		2.82	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	PAA1	YDR071C	576 nt		2.82	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	YIL142C-A	YIL142C-A	333 nt		2.82	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	YAL042C-A	YAL042C-A	378 nt		2.82	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	AIM44	YPL158C	2277 nt		2.82	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	YNL018C	YNL018C	1839 nt		2.82	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	ZRG17	YNR039C	1818 nt		2.82	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	UBP15	YMR304W	3693 nt		2.81	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	tC(GCA)B	tC(GCA)B	72 nt		2.81	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	tC(GCA)G	tC(GCA)G	72 nt		2.81	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	tC(GCA)P1	tC(GCA)P1	72 nt		2.81	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	tC(GCA)P2	tC(GCA)P2	72 nt		2.81	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	YFR012W-A	YFR012W-A	87 nt		2.81	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	ATP7	YKL016C	525 nt		2.81	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	LYS14	YDR034C	2373 nt		2.81	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	YOR296W	YOR296W	3870 nt		2.8	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	MNL2	YLR057W	2550 nt		2.8	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	AHC1	YOR023C	1701 nt		2.8	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	YHR032W-A	YHR032W-A	180 nt		2.8	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	ECM29	YHL030W	5607 nt		2.79	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	RGA2	YDR379W	3030 nt		2.79	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	YPL044C	YPL044C	549 nt		2.79	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	STB4	YMR019W	2850 nt		2.79	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	DBP10	YDL031W	2988 nt		2.79	□□□□□ -1.96
TY4B-P	A0A0B7P3V8	EDS1	YBR033W	2760 nt		2.78	□□□□□ -1.96

Retrieved 100 of 7,029 protein–RNA pairs in 68.6 ms