Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 AC007322.3-201ENST00000426526 701 ntBASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 SLC7A5P2-201ENST00000553010 536 ntBASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 AC105265.2-201ENST00000467189 838 ntBASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 AC243732.1-201ENST00000612648 864 ntBASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV21A0A0B4J279 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV21A0A0B4J279 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV21A0A0B4J279 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV21A0A0B4J279 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAV21A0A0B4J279 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV21A0A0B4J279 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV21A0A0B4J279 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV21A0A0B4J279 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV21A0A0B4J279 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.96□□□□□ -0.01
TRAV21A0A0B4J279 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.96□□□□□ -0.01
TRAV21A0A0B4J279 KRT8P36-201ENST00000489121 1440 ntBASIC14.96□□□□□ -0.01
TRAV21A0A0B4J279 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV21A0A0B4J279 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAV21A0A0B4J279 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV21A0A0B4J279 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV21A0A0B4J279 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV21A0A0B4J279 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAV21A0A0B4J279 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
TRAV21A0A0B4J279 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV21A0A0B4J279 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV21A0A0B4J279 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.96□□□□□ -0.02
TRAV21A0A0B4J279 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.96□□□□□ -0.02
TRAV21A0A0B4J279 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.02
TRAV21A0A0B4J279 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.96□□□□□ -0.02
TRAV21A0A0B4J279 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV21A0A0B4J279 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV21A0A0B4J279 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV21A0A0B4J279 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
TRAV21A0A0B4J279 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV21A0A0B4J279 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV21A0A0B4J279 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV21A0A0B4J279 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV21A0A0B4J279 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV21A0A0B4J279 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV21A0A0B4J279 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV21A0A0B4J279 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV21A0A0B4J279 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV21A0A0B4J279 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
TRAV21A0A0B4J279 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV21A0A0B4J279 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV21A0A0B4J279 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms