Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 CD72-202ENST00000378430 585 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAV12-1A0A0B4J245 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAV12-1A0A0B4J245 AL117332.1-201ENST00000622628 974 ntBASIC14.16□□□□□ -0.14
TRAV12-1A0A0B4J245 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-1A0A0B4J245 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRAV12-1A0A0B4J245 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-1A0A0B4J245 AC120498.9-201ENST00000339021 3867 ntBASIC14.16□□□□□ -0.14
TRAV12-1A0A0B4J245 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-1A0A0B4J245 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-1A0A0B4J245 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-1A0A0B4J245 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAV12-1A0A0B4J245 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
TRAV12-1A0A0B4J245 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRAV12-1A0A0B4J245 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 RARRES2P2-201ENST00000394842 485 ntBASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRAV12-1A0A0B4J245 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
TRAV12-1A0A0B4J245 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 AC006455.2-201ENST00000429931 906 ntBASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 AL691432.2-201ENST00000607222 2038 ntBASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRAV12-1A0A0B4J245 AL049812.1-201ENST00000432563 2267 ntBASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 HES6-204ENST00000409182 863 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 BX664725.1-201ENST00000438252 379 ntBASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 AC103724.3-201ENST00000564481 992 ntBASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 MTDHP2-201ENST00000601468 714 ntBASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 AC092028.1-203ENST00000608262 953 ntBASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV12-1A0A0B4J245 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms