Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.86■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 KRT18P68-201ENST00000392293 1000 ntBASIC17.86■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.86■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.86■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 AC105020.6-201ENST00000621523 1217 ntBASIC17.86■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.86■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 KRT17P1-201ENST00000399211 1546 ntBASIC17.85■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.85■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.85■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 OR10C1-204ENST00000622521 1039 ntBASIC17.85■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 CROCCP5-201ENST00000436658 830 ntBASIC17.84■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.84■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.84■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.84■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.84■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.83■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.83■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.83■□□□□ 0.45
IGKV1D-43A0A0B4J1Z2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 MIR663A-201ENST00000385250 93 ntBASIC17.83■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.83■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 AC026185.1-201ENST00000445748 174 ntBASIC17.83■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.83■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 PTBP1P-201ENST00000554374 1601 ntBASIC17.83■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.83■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 AL512625.2-201ENST00000417533 625 ntBASIC17.82■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.82■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.82■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 AL691432.2-201ENST00000607222 2038 ntBASIC17.82■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 BX119927.1-201ENST00000636596 1552 ntBASIC17.82■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGKV1D-43A0A0B4J1Z2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms