Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 CRTAM-201ENST00000227348 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AC245060.6-201ENST00000624350 8420 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 RN7SKP184-201ENST00000362348 333 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 RN7SKP63-201ENST00000363187 301 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AL139100.1-201ENST00000408001 498 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 RN7SKP221-201ENST00000410420 301 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 RN7SKP131-201ENST00000410698 301 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 RN7SKP251-201ENST00000410830 314 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 RNU2-18P-201ENST00000411224 162 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AC016027.1-201ENST00000426483 805 ntTSL 3 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 EIF2S2P3-201ENST00000428356 999 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AL441943.1-201ENST00000435539 432 ntTSL 3 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AC239860.1-201ENST00000444680 1270 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AC092634.4-203ENST00000451395 448 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 TAAR4P-201ENST00000454843 1039 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 RPL3P10-201ENST00000476002 1164 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AC093010.2-201ENST00000481773 743 ntTSL 3 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 NPM1P28-201ENST00000492269 840 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AC105391.1-201ENST00000503155 1045 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 MCC-209ENST00000515367 3844 ntTSL 5 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AC023946.1-201ENST00000526867 594 ntTSL 3 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AC090079.2-201ENST00000575289 768 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AC129492.5-201ENST00000603489 315 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AC020910.4-201ENST00000612269 540 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AC091059.2-201ENST00000623355 614 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 SEM1-224ENST00000623693 729 ntTSL 5 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 POLR2D-203ENST00000409955 1758 ntTSL 2 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 CTNNA2-217ENST00000540488 2792 ntTSL 5 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 FBN2-203ENST00000507835 1884 ntTSL 5 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 RBMY1D-203ENST00000418956 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 RBMY1B-203ENST00000619219 1491 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 FBXO36-201ENST00000283946 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 MSANTD3-TMEFF1-201ENST00000502978 2069 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AC008522.1-201ENST00000639479 2906 ntBASIC8.06□□□□□ -1.12
NCDNQ9UBB6 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 AL449403.2-201ENST00000624497 2662 ntTSL 2 BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NCDNQ9UBB6 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 SNCA-201ENST00000336904 3041 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 NXF5-205ENST00000473265 1348 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 GEMIN6-201ENST00000281950 3728 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 AP002765.1-201ENST00000528675 1507 ntBASIC8.05□□□□□ -1.12
NCDNQ9UBB6 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 ISX-201ENST00000308700 3384 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 RPL7-203ENST00000396466 762 ntTSL 3 BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 MTND2P12-201ENST00000417560 1252 ntBASIC8.05□□□□□ -1.12
NCDNQ9UBB6 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 E2F6P1-201ENST00000428850 745 ntBASIC8.05□□□□□ -1.12
NCDNQ9UBB6 SNX18P14-201ENST00000429308 574 ntBASIC8.05□□□□□ -1.12
NCDNQ9UBB6 RPL15P1-201ENST00000439981 600 ntBASIC8.05□□□□□ -1.12
NCDNQ9UBB6 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
NCDNQ9UBB6 RPS18P13-201ENST00000461260 454 ntBASIC8.05□□□□□ -1.12
NCDNQ9UBB6 AC022730.1-201ENST00000473114 568 ntBASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms