Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 OVCH1-AS1-201ENST00000549411 743 ntTSL 3 BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 AC009269.2-201ENST00000559892 474 ntBASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 RBM22P13-201ENST00000569805 1244 ntBASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 AC090287.1-201ENST00000578374 291 ntBASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 RPL23AP90-201ENST00000603820 236 ntBASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 RN7SL82P-201ENST00000611435 237 ntBASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 RN7SL628P-201ENST00000619139 237 ntBASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 REST-209ENST00000622863 1106 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 AC007221.2-201ENST00000634367 948 ntTSL 5 BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 KDELC1P1-201ENST00000512118 1509 ntBASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 FBN2-203ENST00000507835 1884 ntTSL 5 BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.26□□□□□ -1.25
NPIPA3F8WFD2 CYP4A22-202ENST00000371890 1780 ntTSL 5 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 AC008985.1-201ENST00000624169 2239 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 AC078795.1-201ENST00000602342 3143 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 TRIM53BP-201ENST00000532912 1720 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 RNA5SP161-201ENST00000363871 115 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 AMELY-202ENST00000383036 621 ntTSL 5 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 AL671986.1-201ENST00000422197 955 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 AC098828.1-201ENST00000436164 440 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 RPL6P24-201ENST00000445338 864 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 RN7SL740P-201ENST00000467060 344 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 RN7SL89P-201ENST00000480252 283 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 AC116353.1-201ENST00000489727 316 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 AC068134.3-201ENST00000513620 788 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 AL355076.3-201ENST00000555838 587 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 AC009121.1-201ENST00000574681 1095 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 RN7SL840P-201ENST00000606883 284 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 AC012511.1-201ENST00000608140 449 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 AC244517.3-201ENST00000616254 1235 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 MIR6761-201ENST00000617899 72 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 AC244093.5-201ENST00000619606 718 ntTSL 4 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 CTXN3-204ENST00000620385 1208 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 AP000851.2-201ENST00000629499 721 ntTSL 3 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 FMO9P-202ENST00000488458 1535 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 PWAR5-201ENST00000624480 3180 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 MAPK10-285ENST00000641207 2746 ntBASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
NPIPA3F8WFD2 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
NPIPA3F8WFD2 WASF4P-201ENST00000444248 1494 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms