Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RPL13AP7-201ENST00000425147 611 ntBASIC8.23□□□□□ -1.09
NID1P14543 RFX3-AS1-202ENST00000427722 1088 ntTSL 5 BASIC8.23□□□□□ -1.09
NID1P14543 AC124944.2-201ENST00000429866 1242 ntBASIC8.23□□□□□ -1.09
NID1P14543 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC8.23□□□□□ -1.09
NID1P14543 Z83841.1-201ENST00000433173 968 ntBASIC8.23□□□□□ -1.09
NID1P14543 LINC01526-201ENST00000441949 520 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NID1P14543 AC006326.1-201ENST00000445465 787 ntBASIC8.23□□□□□ -1.09
NID1P14543 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC8.23□□□□□ -1.09
NID1P14543 LINC01738-201ENST00000454285 815 ntTSL 3 BASIC8.23□□□□□ -1.09
NID1P14543 MTND3P7-201ENST00000474435 343 ntBASIC8.23□□□□□ -1.09
NID1P14543 RN7SL302P-201ENST00000475999 300 ntBASIC8.23□□□□□ -1.09
NID1P14543 RPL7AP8-201ENST00000481963 804 ntBASIC8.23□□□□□ -1.09
NID1P14543 MTAPP1-201ENST00000489154 819 ntBASIC8.23□□□□□ -1.09
NID1P14543 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC8.23□□□□□ -1.09
NID1P14543 VKORC1-208ENST00000498155 870 ntTSL 5 BASIC8.23□□□□□ -1.09
NID1P14543 EGFLAM-207ENST00000506135 889 ntTSL 3 BASIC8.23□□□□□ -1.09
NID1P14543 AC112518.2-201ENST00000508565 425 ntBASIC8.23□□□□□ -1.09
NID1P14543 AC084357.2-201ENST00000509615 275 ntTSL 5 BASIC8.23□□□□□ -1.09
NID1P14543 AC022092.1-201ENST00000510230 504 ntTSL 3 BASIC8.23□□□□□ -1.09
NID1P14543 LINC01438-201ENST00000512794 556 ntTSL 4 BASIC8.23□□□□□ -1.09
NID1P14543 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC8.23□□□□□ -1.09
NID1P14543 AC008591.1-202ENST00000515569 462 ntTSL 2 BASIC8.23□□□□□ -1.09
NID1P14543 AC120193.1-204ENST00000519689 651 ntTSL 4 BASIC8.23□□□□□ -1.09
NID1P14543 ATM-209ENST00000526567 560 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NID1P14543 LINC01499-202ENST00000529282 563 ntTSL 4 BASIC8.23□□□□□ -1.09
NID1P14543 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC8.23□□□□□ -1.09
NID1P14543 KCTD21-AS1-205ENST00000530261 910 ntTSL 4 BASIC8.23□□□□□ -1.09
NID1P14543 LINC01499-203ENST00000530379 555 ntTSL 4 BASIC8.23□□□□□ -1.09
NID1P14543 AC016144.1-201ENST00000548175 1087 ntBASIC8.23□□□□□ -1.09
NID1P14543 AL157955.2-202ENST00000553921 467 ntTSL 3 BASIC8.23□□□□□ -1.09
NID1P14543 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC8.23□□□□□ -1.09
NID1P14543 AP005328.1-202ENST00000580781 776 ntTSL 3 BASIC8.23□□□□□ -1.09
NID1P14543 ZNF527-204ENST00000587349 999 ntTSL 3 BASIC8.23□□□□□ -1.09
NID1P14543 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC8.23□□□□□ -1.09
NID1P14543 AC136475.8-201ENST00000602809 386 ntTSL 5 BASIC8.23□□□□□ -1.09
NID1P14543 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC8.23□□□□□ -1.09
NID1P14543 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC8.23□□□□□ -1.09
NID1P14543 TUG1_1.1-201ENST00000610654 145 ntBASIC8.23□□□□□ -1.09
NID1P14543 AC079395.2-201ENST00000610982 737 ntBASIC8.23□□□□□ -1.09
NID1P14543 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC8.23□□□□□ -1.09
NID1P14543 AC002401.3-201ENST00000620020 440 ntBASIC8.23□□□□□ -1.09
NID1P14543 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
NID1P14543 TEX46-203ENST00000622840 479 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
NID1P14543 AC093875.1-201ENST00000623688 504 ntBASIC8.23□□□□□ -1.09
NID1P14543 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC8.23□□□□□ -1.09
NID1P14543 LINC01206-231ENST00000629026 858 ntTSL 5 BASIC8.23□□□□□ -1.09
NID1P14543 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC8.23□□□□□ -1.09
NID1P14543 AL157371.2-201ENST00000637813 480 ntTSL 4 BASIC8.23□□□□□ -1.09
NID1P14543 LINC01858-201ENST00000564534 1838 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NID1P14543 AL583836.1-201ENST00000464755 2395 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
NID1P14543 ZNF611-206ENST00000595798 2395 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NID1P14543 MMP3-201ENST00000299855 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NID1P14543 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC8.23□□□□□ -1.09
NID1P14543 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC8.23□□□□□ -1.09
NID1P14543 TOP1-201ENST00000361337 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NID1P14543 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
NID1P14543 ZNF736P9Y-201ENST00000439586 1345 ntBASIC8.23□□□□□ -1.09
NID1P14543 NXF5-205ENST00000473265 1348 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
NID1P14543 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NID1P14543 STEAP3-AS1-201ENST00000454260 3218 ntTSL 2 BASIC8.23□□□□□ -1.09
NID1P14543 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NID1P14543 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NID1P14543 DHRS9-201ENST00000357546 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NID1P14543 CAB39L-202ENST00000355854 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NID1P14543 ZNF189-204ENST00000615466 2316 ntTSL 3 BASIC8.23□□□□□ -1.09
NID1P14543 MCM3AP-AS1-201ENST00000414659 2539 ntTSL 2 BASIC8.23□□□□□ -1.09
NID1P14543 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC8.23□□□□□ -1.09
NID1P14543 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
NID1P14543 PIGN-201ENST00000357637 4723 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
NID1P14543 LINC02009-201ENST00000635852 2951 ntTSL 3 BASIC8.22□□□□□ -1.09
NID1P14543 CAPN3-201ENST00000318023 3172 ntTSL 5 BASIC8.22□□□□□ -1.09
NID1P14543 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NID1P14543 SWT1-202ENST00000367501 3001 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
NID1P14543 KEL-201ENST00000355265 2812 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NID1P14543 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
NID1P14543 AL390237.1-201ENST00000404226 1415 ntBASIC8.22□□□□□ -1.09
NID1P14543 PREPL-208ENST00000410081 3080 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
NID1P14543 LRRC49-203ENST00000443425 3085 ntTSL 2 BASIC8.22□□□□□ -1.09
NID1P14543 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NID1P14543 USP17L21-202ENST00000621388 1677 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
NID1P14543 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
NID1P14543 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
NID1P14543 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
NID1P14543 RNU6-670P-201ENST00000364312 104 ntBASIC8.22□□□□□ -1.09
NID1P14543 LRMDA-201ENST00000372499 899 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
NID1P14543 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC8.22□□□□□ -1.09
NID1P14543 AJ239321.1-201ENST00000424255 564 ntBASIC8.22□□□□□ -1.09
NID1P14543 ELOA-AS1-201ENST00000427796 1074 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
NID1P14543 AC009501.2-201ENST00000428700 312 ntBASIC8.22□□□□□ -1.09
NID1P14543 CHCHD4P2-201ENST00000431135 420 ntBASIC8.22□□□□□ -1.09
NID1P14543 AL109659.1-201ENST00000431986 651 ntTSL 3 BASIC8.22□□□□□ -1.09
NID1P14543 RPL12P15-201ENST00000433385 499 ntBASIC8.22□□□□□ -1.09
NID1P14543 AC098826.1-201ENST00000433943 471 ntBASIC8.22□□□□□ -1.09
NID1P14543 ISCA1P2-201ENST00000438679 421 ntBASIC8.22□□□□□ -1.09
NID1P14543 AC098614.3-201ENST00000438957 440 ntBASIC8.22□□□□□ -1.09
NID1P14543 AL031289.1-201ENST00000440100 471 ntTSL 3 BASIC8.22□□□□□ -1.09
NID1P14543 AP000532.1-201ENST00000440999 177 ntBASIC8.22□□□□□ -1.09
NID1P14543 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC8.22□□□□□ -1.09
NID1P14543 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC8.22□□□□□ -1.09
NID1P14543 RPE-216ENST00000454822 2130 ntTSL 2 BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms