Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RBM5-AS1-201ENST00000630404 1386 ntBASIC8.23□□□□□ -1.09
SLC1A1P43005 MAPK10-377ENST00000642006 2752 ntBASIC8.23□□□□□ -1.09
SLC1A1P43005 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.23□□□□□ -1.09
SLC1A1P43005 TRAF6P1-201ENST00000429404 1558 ntBASIC8.23□□□□□ -1.09
SLC1A1P43005 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC8.23□□□□□ -1.09
SLC1A1P43005 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC8.23□□□□□ -1.09
SLC1A1P43005 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 AC114786.2-201ENST00000510090 1426 ntBASIC8.23□□□□□ -1.09
SLC1A1P43005 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
SLC1A1P43005 NONOP2-201ENST00000414613 1231 ntBASIC8.23□□□□□ -1.09
SLC1A1P43005 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC8.23□□□□□ -1.09
SLC1A1P43005 OCM-202ENST00000416608 623 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
SLC1A1P43005 RPSAP2-201ENST00000416785 888 ntBASIC8.23□□□□□ -1.09
SLC1A1P43005 RPL7AP72-201ENST00000417266 768 ntBASIC8.23□□□□□ -1.09
SLC1A1P43005 USP32P1-203ENST00000417524 1014 ntTSL 5 BASIC8.23□□□□□ -1.09
SLC1A1P43005 ENTPD3-AS1-201ENST00000420850 791 ntTSL 2 BASIC8.23□□□□□ -1.09
SLC1A1P43005 AP001342.1-201ENST00000423389 525 ntBASIC8.23□□□□□ -1.09
SLC1A1P43005 AC097358.1-201ENST00000438827 582 ntBASIC8.23□□□□□ -1.09
SLC1A1P43005 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC8.23□□□□□ -1.09
SLC1A1P43005 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC8.23□□□□□ -1.09
SLC1A1P43005 AC093297.2-201ENST00000503452 738 ntTSL 2 BASIC8.23□□□□□ -1.09
SLC1A1P43005 AC110800.1-201ENST00000505498 441 ntTSL 2 BASIC8.23□□□□□ -1.09
SLC1A1P43005 CARD8-214ENST00000520007 614 ntTSL 2 BASIC8.23□□□□□ -1.09
SLC1A1P43005 CRYAB-215ENST00000533971 981 ntTSL 2 BASIC8.23□□□□□ -1.09
SLC1A1P43005 HNF1A-AS1-202ENST00000535301 536 ntTSL 4 BASIC8.23□□□□□ -1.09
SLC1A1P43005 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC8.23□□□□□ -1.09
SLC1A1P43005 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC8.23□□□□□ -1.09
SLC1A1P43005 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC8.23□□□□□ -1.09
SLC1A1P43005 AC005609.2-201ENST00000623320 592 ntBASIC8.23□□□□□ -1.09
SLC1A1P43005 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC8.23□□□□□ -1.09
SLC1A1P43005 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
SLC1A1P43005 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC8.23□□□□□ -1.09
SLC1A1P43005 LINC02128-205ENST00000641755 1334 ntBASIC8.23□□□□□ -1.09
SLC1A1P43005 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.23□□□□□ -1.09
SLC1A1P43005 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC8.23□□□□□ -1.09
SLC1A1P43005 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
SLC1A1P43005 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
SLC1A1P43005 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.23□□□□□ -1.09
SLC1A1P43005 AC107058.1-201ENST00000513297 1384 ntBASIC8.22□□□□□ -1.09
SLC1A1P43005 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
SLC1A1P43005 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SLC1A1P43005 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
SLC1A1P43005 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
SLC1A1P43005 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
SLC1A1P43005 SCHLAP1-201ENST00000629145 1436 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SLC1A1P43005 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
SLC1A1P43005 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SLC1A1P43005 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
SLC1A1P43005 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC8.22□□□□□ -1.09
SLC1A1P43005 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC8.22□□□□□ -1.09
SLC1A1P43005 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
SLC1A1P43005 FMO10P-201ENST00000455032 1493 ntBASIC8.22□□□□□ -1.09
SLC1A1P43005 ALG8-221ENST00000615266 1469 ntTSL 5 BASIC8.22□□□□□ -1.09
SLC1A1P43005 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SLC1A1P43005 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
SLC1A1P43005 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SLC1A1P43005 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
SLC1A1P43005 AC131097.2-201ENST00000404031 595 ntAPPRIS ALT2 TSL 3 BASIC8.22□□□□□ -1.09
SLC1A1P43005 U3.34-201ENST00000408198 212 ntBASIC8.22□□□□□ -1.09
SLC1A1P43005 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SLC1A1P43005 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC8.22□□□□□ -1.09
SLC1A1P43005 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC8.22□□□□□ -1.09
SLC1A1P43005 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC8.22□□□□□ -1.09
SLC1A1P43005 CTBP2P1-201ENST00000431853 245 ntBASIC8.22□□□□□ -1.09
SLC1A1P43005 ANKRD54P1-201ENST00000433115 471 ntBASIC8.22□□□□□ -1.09
SLC1A1P43005 RN7SL520P-201ENST00000474110 286 ntBASIC8.22□□□□□ -1.09
SLC1A1P43005 GSTO3P-201ENST00000504733 718 ntBASIC8.22□□□□□ -1.09
SLC1A1P43005 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC8.22□□□□□ -1.09
SLC1A1P43005 AC107385.1-201ENST00000507985 778 ntBASIC8.22□□□□□ -1.09
SLC1A1P43005 GAPDHP44-201ENST00000513513 1007 ntBASIC8.22□□□□□ -1.09
SLC1A1P43005 CTHRC1-203ENST00000520337 1198 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SLC1A1P43005 AC091820.2-201ENST00000521697 523 ntTSL 4 BASIC8.22□□□□□ -1.09
SLC1A1P43005 AC091096.1-201ENST00000521955 614 ntTSL 3 BASIC8.22□□□□□ -1.09
SLC1A1P43005 AC123767.1-204ENST00000523523 273 ntTSL 3 BASIC8.22□□□□□ -1.09
SLC1A1P43005 AC025165.2-201ENST00000549477 699 ntTSL 3 BASIC8.22□□□□□ -1.09
SLC1A1P43005 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC8.22□□□□□ -1.09
SLC1A1P43005 RN7SL49P-201ENST00000581392 298 ntBASIC8.22□□□□□ -1.09
SLC1A1P43005 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC8.22□□□□□ -1.09
SLC1A1P43005 AC010680.5-201ENST00000605021 463 ntBASIC8.22□□□□□ -1.09
SLC1A1P43005 AL390882.1-201ENST00000618821 594 ntBASIC8.22□□□□□ -1.09
SLC1A1P43005 CU634019.6-201ENST00000623165 710 ntTSL 5 BASIC8.22□□□□□ -1.09
SLC1A1P43005 USP48-203ENST00000374732 3037 ntTSL 2 BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms