Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 EIF4A1P9-201ENST00000576035 1207 ntBASIC7.33□□□□□ -1.24
NPIPA3F8WFD2 SKA2-203ENST00000578105 689 ntTSL 2 BASIC7.33□□□□□ -1.24
NPIPA3F8WFD2 RN7SL376P-201ENST00000578594 264 ntBASIC7.33□□□□□ -1.24
NPIPA3F8WFD2 VDAC1P5-201ENST00000603132 844 ntBASIC7.33□□□□□ -1.24
NPIPA3F8WFD2 ACTG1P22-201ENST00000603793 1099 ntBASIC7.33□□□□□ -1.24
NPIPA3F8WFD2 AC245028.3-201ENST00000618197 285 ntBASIC7.33□□□□□ -1.24
NPIPA3F8WFD2 AC010320.5-201ENST00000619124 676 ntBASIC7.33□□□□□ -1.24
NPIPA3F8WFD2 PFN1P2-202ENST00000621347 397 ntBASIC7.33□□□□□ -1.24
NPIPA3F8WFD2 AL359834.1-201ENST00000635660 638 ntTSL 4 BASIC7.33□□□□□ -1.24
NPIPA3F8WFD2 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPIPA3F8WFD2 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPIPA3F8WFD2 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
NPIPA3F8WFD2 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC7.33□□□□□ -1.24
NPIPA3F8WFD2 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
NPIPA3F8WFD2 AP000705.2-201ENST00000433524 1386 ntBASIC7.33□□□□□ -1.24
NPIPA3F8WFD2 RAB11A-209ENST00000569896 1396 ntTSL 2 BASIC7.33□□□□□ -1.24
NPIPA3F8WFD2 AC008937.3-201ENST00000606813 1700 ntBASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 AC006269.1-201ENST00000636752 2789 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 IL24-202ENST00000367093 1819 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 KCNMB2-207ENST00000452583 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 COLGALT2-202ENST00000367520 2325 ntTSL 2 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 AMTN-201ENST00000339336 1037 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 FANK1-201ENST00000368689 522 ntTSL 3 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 MIR128-2-201ENST00000384893 84 ntBASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 EIF4A1P10-201ENST00000428832 1216 ntBASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 AC090680.1-201ENST00000464696 860 ntBASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 AC107385.1-201ENST00000507985 778 ntBASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 AC093297.2-202ENST00000514597 659 ntTSL 3 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 IGHVII-78-1-201ENST00000521105 269 ntBASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 IGHVIII-82-201ENST00000522058 250 ntBASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 AC007570.1-201ENST00000539987 603 ntTSL 3 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 LINC00662-207ENST00000590677 883 ntTSL 5 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 AC005034.2-201ENST00000604464 414 ntBASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 AP000436.1-201ENST00000605239 800 ntBASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 NLRP9P1-201ENST00000540920 2655 ntBASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 AC107058.1-201ENST00000513297 1384 ntBASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 SSBP2-212ENST00000509053 1534 ntTSL 2 BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
NPIPA3F8WFD2 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 IL18R1-201ENST00000233957 3661 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 FHL1-230ENST00000630084 1335 ntTSL 2 BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 AC117382.2-201ENST00000564748 3151 ntBASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 AL139811.2-201ENST00000373465 1630 ntBASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 CU633967.1-204ENST00000624627 1604 ntTSL 2 BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 HYDIN2-203ENST00000614586 13885 ntBASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 BBS4-201ENST00000268057 2490 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 MSRB1P1-201ENST00000396851 354 ntBASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 CCNYL3-201ENST00000407030 998 ntBASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 ATP13A4-AS1-201ENST00000426459 795 ntTSL 3 BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 AP002383.1-201ENST00000439405 720 ntBASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 EFCAB14P1-201ENST00000442409 463 ntBASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 PRMT8-203ENST00000452611 1204 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 AL391361.2-202ENST00000454826 439 ntTSL 5 BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 RN7SL563P-201ENST00000481233 298 ntBASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 RN7SL314P-201ENST00000490735 292 ntBASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 GAPDHP38-201ENST00000503632 1002 ntBASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 AF186996.3-201ENST00000509527 964 ntBASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 ADI1P2-201ENST00000514945 429 ntBASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 RN7SKP14-201ENST00000516000 329 ntBASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
NPIPA3F8WFD2 AC009779.4-201ENST00000554248 611 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms