Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 SNORA71D-201ENST00000363484 134 ntBASIC8.47□□□□□ -1.05
LMO3Q8TAP4 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 RNA5SP185-201ENST00000390963 114 ntBASIC8.47□□□□□ -1.05
LMO3Q8TAP4 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 RN7SKP261-201ENST00000410948 278 ntBASIC8.47□□□□□ -1.05
LMO3Q8TAP4 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 CLUHP5-201ENST00000438421 774 ntBASIC8.47□□□□□ -1.05
LMO3Q8TAP4 AC012494.1-201ENST00000439259 1103 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 AC120057.1-201ENST00000483947 663 ntBASIC8.47□□□□□ -1.05
LMO3Q8TAP4 AL031073.1-201ENST00000503029 1139 ntBASIC8.47□□□□□ -1.05
LMO3Q8TAP4 GAPDHP31-201ENST00000509325 1014 ntBASIC8.47□□□□□ -1.05
LMO3Q8TAP4 GZMB-205ENST00000526004 819 ntTSL 3 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 SSR2-215ENST00000529008 849 ntTSL 5 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 AC009171.1-201ENST00000572673 266 ntBASIC8.47□□□□□ -1.05
LMO3Q8TAP4 RN7SL473P-201ENST00000580341 299 ntBASIC8.47□□□□□ -1.05
LMO3Q8TAP4 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 AC099811.5-201ENST00000617211 819 ntTSL 5 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 AL606760.4-201ENST00000617613 718 ntBASIC8.47□□□□□ -1.05
LMO3Q8TAP4 AC245028.3-201ENST00000618197 285 ntBASIC8.47□□□□□ -1.05
LMO3Q8TAP4 AC012557.3-201ENST00000626439 255 ntBASIC8.47□□□□□ -1.05
LMO3Q8TAP4 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 LINC00641-202ENST00000555688 1763 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
LMO3Q8TAP4 AP000705.2-201ENST00000433524 1386 ntBASIC8.47□□□□□ -1.05
LMO3Q8TAP4 AC106800.1-201ENST00000501221 1362 ntBASIC8.47□□□□□ -1.05
LMO3Q8TAP4 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
LMO3Q8TAP4 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
LMO3Q8TAP4 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
LMO3Q8TAP4 NLRP14-201ENST00000299481 3628 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
LMO3Q8TAP4 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
LMO3Q8TAP4 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.05
LMO3Q8TAP4 AC022415.1-201ENST00000472362 1517 ntBASIC8.46□□□□□ -1.05
LMO3Q8TAP4 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 SLC28A2-201ENST00000347644 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 AKR1E2-203ENST00000345253 913 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 RANP5-201ENST00000427731 655 ntBASIC8.46□□□□□ -1.06
LMO3Q8TAP4 RPL7P7-201ENST00000428803 703 ntBASIC8.46□□□□□ -1.06
LMO3Q8TAP4 AL136452.1-201ENST00000448495 439 ntBASIC8.46□□□□□ -1.06
LMO3Q8TAP4 C15orf40-202ENST00000451195 518 ntTSL 3 BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 RN7SL388P-201ENST00000498736 339 ntBASIC8.46□□□□□ -1.06
LMO3Q8TAP4 HOXB-AS1-203ENST00000504972 680 ntTSL 3 BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 MTND6P19-201ENST00000519399 524 ntBASIC8.46□□□□□ -1.06
LMO3Q8TAP4 AC025419.1-202ENST00000535315 744 ntTSL 3 BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 AC073896.5-201ENST00000546464 542 ntTSL 5 BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 THAP2-202ENST00000547843 672 ntTSL 2 BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 AC026111.1-201ENST00000551090 1195 ntBASIC8.46□□□□□ -1.06
LMO3Q8TAP4 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 OR7A18P-201ENST00000600416 277 ntBASIC8.46□□□□□ -1.06
LMO3Q8TAP4 AC016405.2-201ENST00000607393 312 ntBASIC8.46□□□□□ -1.06
LMO3Q8TAP4 EIF5P2-201ENST00000618904 1035 ntBASIC8.46□□□□□ -1.06
LMO3Q8TAP4 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 ITM2A-202ENST00000434584 1698 ntTSL 2 BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC8.46□□□□□ -1.06
LMO3Q8TAP4 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AC107398.3-201ENST00000562284 7000 ntBASIC8.45□□□□□ -1.06
LMO3Q8TAP4 CU633906.2-205ENST00000624847 1468 ntTSL 5 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 GSG1-203ENST00000396302 1628 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AP001595.1-201ENST00000435878 516 ntTSL 2 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AL512882.1-201ENST00000436086 832 ntBASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AL158168.1-201ENST00000443282 357 ntTSL 3 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC8.45□□□□□ -1.06
LMO3Q8TAP4 MED28P8-201ENST00000454831 521 ntBASIC8.45□□□□□ -1.06
LMO3Q8TAP4 AL590648.1-201ENST00000456479 460 ntBASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms