Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 ZSCAN31-202ENST00000396838 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 ADGRE1-205ENST00000450315 2567 ntTSL 2 BASIC7.37□□□□□ -1.23
P04436 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 ZNF207-202ENST00000342555 1905 ntTSL 5 BASIC7.37□□□□□ -1.23
P04436 ZNF192P2-201ENST00000402215 1383 ntBASIC7.37□□□□□ -1.23
P04436 SLC7A8-206ENST00000469263 3557 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 SNTG1-207ENST00000522124 3504 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC7.37□□□□□ -1.23
P04436 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 SNORA71D-201ENST00000363484 134 ntBASIC7.37□□□□□ -1.23
P04436 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 BEND6-201ENST00000370745 579 ntTSL 5 BASIC7.37□□□□□ -1.23
P04436 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 RNVU1-15-201ENST00000384476 165 ntBASIC7.37□□□□□ -1.23
P04436 AL022724.1-201ENST00000412132 554 ntTSL 3 BASIC7.37□□□□□ -1.23
P04436 GNAI2P2-201ENST00000417003 916 ntBASIC7.37□□□□□ -1.23
P04436 ATP13A4-AS1-201ENST00000426459 795 ntTSL 3 BASIC7.37□□□□□ -1.23
P04436 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC7.37□□□□□ -1.23
P04436 AC097358.1-201ENST00000438827 582 ntBASIC7.37□□□□□ -1.23
P04436 AC245047.6-201ENST00000445444 617 ntBASIC7.37□□□□□ -1.23
P04436 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC7.37□□□□□ -1.23
P04436 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC7.37□□□□□ -1.23
P04436 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC7.37□□□□□ -1.23
P04436 RN7SL201P-201ENST00000482306 296 ntBASIC7.37□□□□□ -1.23
P04436 RPL7AP26-201ENST00000488538 813 ntBASIC7.37□□□□□ -1.23
P04436 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC7.37□□□□□ -1.23
P04436 RN7SL519P-201ENST00000497925 288 ntBASIC7.37□□□□□ -1.23
P04436 AL449212.1-201ENST00000499853 517 ntBASIC7.37□□□□□ -1.23
P04436 HEXB-205ENST00000509579 806 ntTSL 2 BASIC7.37□□□□□ -1.23
P04436 AC100849.1-202ENST00000517949 562 ntTSL 3 BASIC7.37□□□□□ -1.23
P04436 AC091096.1-201ENST00000521955 614 ntTSL 3 BASIC7.37□□□□□ -1.23
P04436 OR4A9P-201ENST00000526326 944 ntBASIC7.37□□□□□ -1.23
P04436 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC7.37□□□□□ -1.23
P04436 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC7.37□□□□□ -1.23
P04436 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC7.37□□□□□ -1.23
P04436 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
P04436 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC7.37□□□□□ -1.23
P04436 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC7.37□□□□□ -1.23
P04436 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC7.37□□□□□ -1.23
P04436 AL049829.3-202ENST00000604278 711 ntBASIC7.37□□□□□ -1.23
P04436 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC7.37□□□□□ -1.23
P04436 AC245028.3-201ENST00000618197 285 ntBASIC7.37□□□□□ -1.23
P04436 AC244093.5-201ENST00000619606 718 ntTSL 4 BASIC7.37□□□□□ -1.23
P04436 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 REST-209ENST00000622863 1106 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC7.37□□□□□ -1.23
P04436 ARMC3-204ENST00000409983 2779 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
P04436 GALNT15-206ENST00000617544 2775 ntTSL 5 BASIC7.37□□□□□ -1.23
P04436 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
P04436 AC092279.2-201ENST00000623742 2189 ntBASIC7.37□□□□□ -1.23
P04436 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 AL139811.2-201ENST00000373465 1630 ntBASIC7.37□□□□□ -1.23
P04436 CCT5P1-201ENST00000502314 1618 ntBASIC7.37□□□□□ -1.23
P04436 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC7.37□□□□□ -1.23
P04436 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC7.37□□□□□ -1.23
P04436 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 STAU2-AS1-201ENST00000517604 2076 ntTSL 2 BASIC7.37□□□□□ -1.23
P04436 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 KIF23-202ENST00000352331 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC7.37□□□□□ -1.23
P04436 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
P04436 LINC01915-201ENST00000577994 2321 ntTSL 2 BASIC7.36□□□□□ -1.23
P04436 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC7.36□□□□□ -1.23
P04436 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC7.36□□□□□ -1.23
P04436 THG1L-201ENST00000231198 3107 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
P04436 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC7.36□□□□□ -1.23
P04436 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.36□□□□□ -1.23
P04436 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
P04436 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
P04436 TTF1-201ENST00000334270 3052 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
P04436 CD40LG-202ENST00000370629 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
P04436 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
P04436 SERPINE2-203ENST00000409840 2569 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
P04436 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
P04436 AC026356.1-201ENST00000622688 1357 ntBASIC7.36□□□□□ -1.23
P04436 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
P04436 ZNF225-206ENST00000592780 2538 ntTSL 5 BASIC7.36□□□□□ -1.23
P04436 AC012513.3-201ENST00000623250 2116 ntBASIC7.36□□□□□ -1.23
P04436 AL049646.1-201ENST00000457009 2490 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
P04436 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
P04436 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC7.36□□□□□ -1.23
P04436 VIT-202ENST00000379242 2810 ntAPPRIS P3 TSL 2 BASIC7.36□□□□□ -1.23
P04436 AL391666.1-201ENST00000442570 2764 ntBASIC7.36□□□□□ -1.23
P04436 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
P04436 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC7.36□□□□□ -1.23
P04436 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
P04436 AL133279.3-201ENST00000563140 2352 ntBASIC7.36□□□□□ -1.23
P04436 MS4A2-201ENST00000278888 1152 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
P04436 OR4D6-201ENST00000300127 1054 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
P04436 FAM177B-201ENST00000360827 764 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
P04436 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC7.36□□□□□ -1.23
P04436 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC7.36□□□□□ -1.23
P04436 AL671986.1-201ENST00000422197 955 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms