Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COMMD3-BMI1R4GMX3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
COMMD3-BMI1R4GMX3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COMMD3-BMI1R4GMX3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.93■□□□□ 0.62
COMMD3-BMI1R4GMX3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.93■□□□□ 0.62
COMMD3-BMI1R4GMX3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.93■□□□□ 0.62
COMMD3-BMI1R4GMX3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.93■□□□□ 0.62
COMMD3-BMI1R4GMX3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.93■□□□□ 0.62
COMMD3-BMI1R4GMX3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COMMD3-BMI1R4GMX3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COMMD3-BMI1R4GMX3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 FZD10-202ENST00000539839 3282 ntBASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 AC007225.1-201ENST00000566331 1836 ntBASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COMMD3-BMI1R4GMX3 AP000997.3-201ENST00000623333 2250 ntBASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
COMMD3-BMI1R4GMX3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 PCDHB18P-201ENST00000524813 2368 ntBASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 AL136116.3-201ENST00000402907 1138 ntBASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COMMD3-BMI1R4GMX3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
COMMD3-BMI1R4GMX3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
COMMD3-BMI1R4GMX3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.89■□□□□ 0.61
COMMD3-BMI1R4GMX3 AP004607.7-201ENST00000527152 1677 ntBASIC18.89■□□□□ 0.61
COMMD3-BMI1R4GMX3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD3-BMI1R4GMX3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COMMD3-BMI1R4GMX3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.89■□□□□ 0.61
COMMD3-BMI1R4GMX3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.89■□□□□ 0.61
COMMD3-BMI1R4GMX3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.89■□□□□ 0.61
COMMD3-BMI1R4GMX3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.89■□□□□ 0.61
COMMD3-BMI1R4GMX3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
COMMD3-BMI1R4GMX3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms