Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCDHGA4Q9Y5G9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHGA4Q9Y5G9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA4Q9Y5G9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCDHGA4Q9Y5G9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA4Q9Y5G9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA4Q9Y5G9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA4Q9Y5G9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCDHGA4Q9Y5G9 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA4Q9Y5G9 AC097658.1-201ENST00000475555 843 ntBASIC19.87■□□□□ 0.77
PCDHGA4Q9Y5G9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHGA4Q9Y5G9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHGA4Q9Y5G9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.87■□□□□ 0.77
PCDHGA4Q9Y5G9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHGA4Q9Y5G9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
PCDHGA4Q9Y5G9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA4Q9Y5G9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHGA4Q9Y5G9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCDHGA4Q9Y5G9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA4Q9Y5G9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PCDHGA4Q9Y5G9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 AC091799.1-201ENST00000422823 811 ntBASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 AL158047.1-201ENST00000445918 881 ntBASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHGA4Q9Y5G9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 AC005229.4-201ENST00000610085 2198 ntBASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 AC006058.3-201ENST00000606217 1069 ntBASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHGA4Q9Y5G9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGA4Q9Y5G9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PCDHGA4Q9Y5G9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PCDHGA4Q9Y5G9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGA4Q9Y5G9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGA4Q9Y5G9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PCDHGA4Q9Y5G9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHGA4Q9Y5G9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.83■□□□□ 0.77
PCDHGA4Q9Y5G9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.83■□□□□ 0.77
PCDHGA4Q9Y5G9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHGA4Q9Y5G9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms