Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA9Q9Y5G4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 AC133681.1-201ENST00000465482 601 ntBASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA9Q9Y5G4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHGA9Q9Y5G4 PKD1P6-201ENST00000343738 4769 ntBASIC18.89■□□□□ 0.62
PCDHGA9Q9Y5G4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDHGA9Q9Y5G4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA9Q9Y5G4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PCDHGA9Q9Y5G4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHGA9Q9Y5G4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA9Q9Y5G4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA9Q9Y5G4 PGM5P4-201ENST00000421970 445 ntBASIC18.89■□□□□ 0.61
PCDHGA9Q9Y5G4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PCDHGA9Q9Y5G4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA9Q9Y5G4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHGA9Q9Y5G4 MTDHP1-201ENST00000605323 784 ntBASIC18.89■□□□□ 0.61
PCDHGA9Q9Y5G4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA9Q9Y5G4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA9Q9Y5G4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA9Q9Y5G4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA9Q9Y5G4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PCDHGA9Q9Y5G4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHGA9Q9Y5G4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 ECEL1P3-201ENST00000427961 737 ntBASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 LINC01023-201ENST00000606054 436 ntBASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 AP001412.1-201ENST00000608405 714 ntBASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 KRT17P2-201ENST00000300992 1314 ntBASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 AC087633.2-202ENST00000565166 1439 ntBASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDHGA9Q9Y5G4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 RPS2P55-201ENST00000397318 883 ntBASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 AC211429.1-201ENST00000415277 523 ntBASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 FAM210CP-201ENST00000445714 574 ntBASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 AC107956.1-201ENST00000494359 873 ntBASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDHGA9Q9Y5G4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms