Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 AC027702.1-201ENST00000563810 1770 ntBASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDHB11Q9Y5F2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 FEM1AP1-201ENST00000431297 1995 ntBASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB11Q9Y5F2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 MCRIP2P1-201ENST00000394346 511 ntBASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 UNC93B4-201ENST00000505679 747 ntBASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 UNC93B5-201ENST00000530315 699 ntBASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 AP003097.1-201ENST00000530657 1135 ntBASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 CYP21A1P-202ENST00000354927 1481 ntBASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHB11Q9Y5F2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 PGM5P4-201ENST00000421970 445 ntBASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 CYP2T3P-201ENST00000601990 817 ntBASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 AL589743.5-201ENST00000616611 1050 ntBASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PCDHB11Q9Y5F2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.75
PCDHB11Q9Y5F2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDHB11Q9Y5F2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.77■□□□□ 0.75
PCDHB11Q9Y5F2 LINC01006-201ENST00000333319 2292 ntBASIC19.77■□□□□ 0.75
PCDHB11Q9Y5F2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PCDHB11Q9Y5F2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB11Q9Y5F2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms