Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PKP3Q9Y446 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PKP3Q9Y446 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PKP3Q9Y446 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PKP3Q9Y446 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.28■□□□□ 0.84
PKP3Q9Y446 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.28■□□□□ 0.84
PKP3Q9Y446 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.28■□□□□ 0.84
PKP3Q9Y446 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.28■□□□□ 0.84
PKP3Q9Y446 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.28■□□□□ 0.84
PKP3Q9Y446 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.28■□□□□ 0.84
PKP3Q9Y446 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PKP3Q9Y446 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PKP3Q9Y446 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PKP3Q9Y446 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.28■□□□□ 0.84
PKP3Q9Y446 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.28■□□□□ 0.84
PKP3Q9Y446 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.28■□□□□ 0.84
PKP3Q9Y446 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.28■□□□□ 0.84
PKP3Q9Y446 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PKP3Q9Y446 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PKP3Q9Y446 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PKP3Q9Y446 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PKP3Q9Y446 KRT17P1-201ENST00000399211 1546 ntBASIC20.27■□□□□ 0.84
PKP3Q9Y446 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PKP3Q9Y446 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PKP3Q9Y446 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PKP3Q9Y446 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PKP3Q9Y446 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PKP3Q9Y446 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PKP3Q9Y446 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.27■□□□□ 0.84
PKP3Q9Y446 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PKP3Q9Y446 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.27■□□□□ 0.84
PKP3Q9Y446 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PKP3Q9Y446 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.27■□□□□ 0.84
PKP3Q9Y446 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.27■□□□□ 0.84
PKP3Q9Y446 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PKP3Q9Y446 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PKP3Q9Y446 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.27■□□□□ 0.84
PKP3Q9Y446 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PKP3Q9Y446 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.27■□□□□ 0.84
PKP3Q9Y446 TSPY6P-201ENST00000448518 926 ntBASIC20.27■□□□□ 0.84
PKP3Q9Y446 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.27■□□□□ 0.84
PKP3Q9Y446 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.27■□□□□ 0.84
PKP3Q9Y446 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PKP3Q9Y446 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PKP3Q9Y446 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.27■□□□□ 0.84
PKP3Q9Y446 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PKP3Q9Y446 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PKP3Q9Y446 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PKP3Q9Y446 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PKP3Q9Y446 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PKP3Q9Y446 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PKP3Q9Y446 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PKP3Q9Y446 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PKP3Q9Y446 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PKP3Q9Y446 LINC01006-201ENST00000333319 2292 ntBASIC20.27■□□□□ 0.83
PKP3Q9Y446 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PKP3Q9Y446 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
PKP3Q9Y446 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PKP3Q9Y446 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PKP3Q9Y446 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.26■□□□□ 0.83
PKP3Q9Y446 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PKP3Q9Y446 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PKP3Q9Y446 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
PKP3Q9Y446 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PKP3Q9Y446 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
PKP3Q9Y446 MIPEPP3-201ENST00000412105 444 ntBASIC20.26■□□□□ 0.83
PKP3Q9Y446 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
PKP3Q9Y446 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.26■□□□□ 0.83
PKP3Q9Y446 AL109923.1-201ENST00000618799 583 ntBASIC20.26■□□□□ 0.83
PKP3Q9Y446 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PKP3Q9Y446 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PKP3Q9Y446 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.26■□□□□ 0.83
PKP3Q9Y446 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PKP3Q9Y446 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PKP3Q9Y446 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PKP3Q9Y446 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PKP3Q9Y446 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PKP3Q9Y446 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PKP3Q9Y446 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PKP3Q9Y446 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PKP3Q9Y446 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.25■□□□□ 0.83
PKP3Q9Y446 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.25■□□□□ 0.83
PKP3Q9Y446 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
PKP3Q9Y446 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PKP3Q9Y446 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PKP3Q9Y446 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PKP3Q9Y446 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.25■□□□□ 0.83
PKP3Q9Y446 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
PKP3Q9Y446 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.25■□□□□ 0.83
PKP3Q9Y446 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.25■□□□□ 0.83
PKP3Q9Y446 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.25■□□□□ 0.83
PKP3Q9Y446 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PKP3Q9Y446 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PKP3Q9Y446 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.25■□□□□ 0.83
PKP3Q9Y446 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PKP3Q9Y446 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PKP3Q9Y446 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PKP3Q9Y446 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PKP3Q9Y446 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PKP3Q9Y446 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms