Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 AL031133.1-201ENST00000406807 723 ntBASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 BX664615.1-201ENST00000443558 458 ntBASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HCN4Q9Y3Q4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HCN4Q9Y3Q4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HCN4Q9Y3Q4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HCN4Q9Y3Q4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HCN4Q9Y3Q4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HCN4Q9Y3Q4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HCN4Q9Y3Q4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
HCN4Q9Y3Q4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HCN4Q9Y3Q4 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.77■□□□□ 0.92
HCN4Q9Y3Q4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.77■□□□□ 0.92
HCN4Q9Y3Q4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.77■□□□□ 0.92
HCN4Q9Y3Q4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
HCN4Q9Y3Q4 MYC-208ENST00000641036 567 ntBASIC20.77■□□□□ 0.92
HCN4Q9Y3Q4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HCN4Q9Y3Q4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HCN4Q9Y3Q4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HCN4Q9Y3Q4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HCN4Q9Y3Q4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCN4Q9Y3Q4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCN4Q9Y3Q4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCN4Q9Y3Q4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCN4Q9Y3Q4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.76■□□□□ 0.91
HCN4Q9Y3Q4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HCN4Q9Y3Q4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
HCN4Q9Y3Q4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.76■□□□□ 0.91
HCN4Q9Y3Q4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCN4Q9Y3Q4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HCN4Q9Y3Q4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HCN4Q9Y3Q4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCN4Q9Y3Q4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.76■□□□□ 0.91
HCN4Q9Y3Q4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HCN4Q9Y3Q4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 AC091799.1-201ENST00000422823 811 ntBASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 AP000347.1-202ENST00000435868 847 ntBASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 KRT16P5-201ENST00000455284 522 ntBASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HCN4Q9Y3Q4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HCN4Q9Y3Q4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HCN4Q9Y3Q4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HCN4Q9Y3Q4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
HCN4Q9Y3Q4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.74■□□□□ 0.91
HCN4Q9Y3Q4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HCN4Q9Y3Q4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HCN4Q9Y3Q4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HCN4Q9Y3Q4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HCN4Q9Y3Q4 AC246785.2-201ENST00000432512 513 ntBASIC20.74■□□□□ 0.91
HCN4Q9Y3Q4 PVRIG2P-201ENST00000435460 978 ntBASIC20.74■□□□□ 0.91
HCN4Q9Y3Q4 AC128688.1-201ENST00000487626 519 ntBASIC20.74■□□□□ 0.91
HCN4Q9Y3Q4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.74■□□□□ 0.91
HCN4Q9Y3Q4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.74■□□□□ 0.91
HCN4Q9Y3Q4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HCN4Q9Y3Q4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.74■□□□□ 0.91
HCN4Q9Y3Q4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HCN4Q9Y3Q4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HCN4Q9Y3Q4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
HCN4Q9Y3Q4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCN4Q9Y3Q4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HCN4Q9Y3Q4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.73■□□□□ 0.91
HCN4Q9Y3Q4 IER3-202ENST00000376377 1350 ntBASIC20.73■□□□□ 0.91
HCN4Q9Y3Q4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.73■□□□□ 0.91
HCN4Q9Y3Q4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCN4Q9Y3Q4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HCN4Q9Y3Q4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms