Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 PCDHB18P-201ENST00000524813 2368 ntBASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.19■□□□□ 0.66
LRCH1Q9Y2L9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH1Q9Y2L9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH1Q9Y2L9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
LRCH1Q9Y2L9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LRCH1Q9Y2L9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.18■□□□□ 0.66
LRCH1Q9Y2L9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.18■□□□□ 0.66
LRCH1Q9Y2L9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LRCH1Q9Y2L9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH1Q9Y2L9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH1Q9Y2L9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCH1Q9Y2L9 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.18■□□□□ 0.66
LRCH1Q9Y2L9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.18■□□□□ 0.66
LRCH1Q9Y2L9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.18■□□□□ 0.66
LRCH1Q9Y2L9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
LRCH1Q9Y2L9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.18■□□□□ 0.66
LRCH1Q9Y2L9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 AP000997.3-201ENST00000623333 2250 ntBASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 AL356740.2-201ENST00000601559 647 ntBASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 AL117332.1-201ENST00000622628 974 ntBASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 FZD10-202ENST00000539839 3282 ntBASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
LRCH1Q9Y2L9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 AC092720.2-201ENST00000602388 1665 ntBASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LRCH1Q9Y2L9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH1Q9Y2L9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH1Q9Y2L9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH1Q9Y2L9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH1Q9Y2L9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH1Q9Y2L9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH1Q9Y2L9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH1Q9Y2L9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH1Q9Y2L9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.15■□□□□ 0.66
LRCH1Q9Y2L9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.15■□□□□ 0.66
LRCH1Q9Y2L9 MIR3621-201ENST00000580529 85 ntBASIC19.15■□□□□ 0.66
LRCH1Q9Y2L9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.15■□□□□ 0.66
LRCH1Q9Y2L9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH1Q9Y2L9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH1Q9Y2L9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH1Q9Y2L9 AC008406.3-201ENST00000620001 1374 ntBASIC19.15■□□□□ 0.66
LRCH1Q9Y2L9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LRCH1Q9Y2L9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms